Molecular characterization of Asian maize inbread lines by multiple laboratories (Record no. 24761)

000 -LEADER
fixed length control field 03576nab a22005177a 4500
001 - CONTROL NUMBER
control field a79598
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20171107152844.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 121211b |||p||p||||||| |z||| |
022 ## - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 1432-2242 (Revista en electrónico)
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
072 #0 - SUBJECT CATEGORY CODE
Subject category code A50
072 #0 - SUBJECT CATEGORY CODE
Subject category code F30
090 ## - LOCALLY ASSIGNED LC-TYPE CALL NUMBER (OCLC); LOCAL CALL NUMBER (RLIN)
Classification number (OCLC) (R) ; Classification number, CALL (RLIN) (NR) CIS-4048
100 1# - MAIN ENTRY--PERSONAL NAME
9 (RLIN) 839
Personal name George, M.L.C.
Miscellaneous information Research & Partnership Program
Field link and sequence number INT2451
245 00 - TITLE STATEMENT
Title Molecular characterization of Asian maize inbread lines by multiple laboratories
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Date of publication, distribution, etc. 2004
340 ## - PHYSICAL MEDIUM
Material base and configuration Computer File
500 ## - GENERAL NOTE
General note DOI 10.1007/s00122-004-1626-8
500 ## - GENERAL NOTE
General note Peer-review: Yes - Open Access: Yes|http://science.thomsonreuters.com/cgi-bin/jrnlst/jlresults.cgi?PC=MASTER&ISSN=0040-5752
520 ## - SUMMARY, ETC.
Summary, etc. This study focuses on the standardization of techniques across laboratories to enable multiple datasets to be compared and combined in order to obtain reliable and robust wide-scale patterns of diversity. A set of protocols using a core collection of simple sequence repeat (SSR) markers, reference lines and standard alleles, plus a common system of allele nomenclature, was adopted in the study of maize genetic diversity in a network of laboratories in Asia. Pair-wise allele comparisons of the reference lines, done to assess the general agreement between datasets from four laboratories, showed error rates (raw) ranging from 5.8% to 9.7%, which were reduced to less than 8% after adjustments of correctable errors, and further reduced to less than 6% after the exclusion of all markers with greater than 10% individual error rates. Overall, 45% of the total mismatches were due to frameshift errors, 39% to wrong allele size, 15% to failed amplification and 1% to extra alleles. Higher genetic similarity values of the reference lines were achieved using fewer markers with data of higher quality rather than with more markers of questionable quality. Cluster analysis of the merged datasets showed the lines from southern China to be highly diverse, falling into six of the seven clusters observed and all well represented by tester lines. The lines from Indonesia fell into five of six groups, with two main groups represented by tester lines. The CIMMYT lines developed for the Asian region showed a relatively narrow genetic base, falling in two out of seven and in three out of six clusters in China and Indonesia, respectively. In contrast to the case in southern China where 95% of the lines clustered separately from the CIMMYT lines, lines in the Indonesian breeding program show a closer relationship with the CIMMYT lines, reflecting a long history of germplasm exchange.
536 ## - FUNDING INFORMATION NOTE
Text of note Research and Partnership Program
546 ## - LANGUAGE NOTE
Language note English
591 ## - CATALOGING NOTES
Affiliation 0406|Springer|AL-Maize Program
594 ## - STAFFID
StaffID INT2451
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Asia
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Crossbreeding
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Diversification
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Inbred lines
9 (RLIN) 1155
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Maize
9 (RLIN) 1173
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Molecular genetics
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Tropical zones
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
9 (RLIN) 1313
Topical term or geographic name as entry element Yields
Miscellaneous information AGROVOC
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
9 (RLIN) 1006
Topical term or geographic name as entry element Agricultural research
Miscellaneous information AGROVOC
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Cao, M.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Dahlan, M.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Hoisington, D.A.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Li, W.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Pabendon, M.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Regalado, E.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Warburton, M.L.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Xianchun Xia,
Relator term coaut.
9 (RLIN) 377
773 0# - HOST ITEM ENTRY
Title Theoretical and Applied Genetics
Note 629960
Related parts v. 109, no. 1, p. 80-91
856 4# - ELECTRONIC LOCATION AND ACCESS
Link text Access only for CIMMYT Staff
Uniform Resource Identifier http://46.20.115.203/download/cis/79598.pdf
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Koha item type Article
Source of classification or shelving scheme
Holdings
Withdrawn status Lost status Damaged status Not for loan Collection code Permanent Location Current Location Date acquired Full call number Barcode Date last seen Copy number Price effective from Koha item type
  Not Lost     CIMMYT Staff Publications Collection CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 2015-02-10 CIS-4048 629960 2015-02-10 1 2015-02-10 Article
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Centro Internacional de Mejoramiento de Maíz y Trigo (CIMMYT) © Copyright 2015. Carretera México-Veracruz. Km. 45, El Batán, Texcoco, México, C.P. 56237.
Si tiene cualquier pregunta, contáctenos a CIMMYT-Knowledge-Center@cgiar.org