Knowledge Center Catalog

Molecular characterization of Asian maize inbred lines by multiple laboratories (Record no. 24761)

MARC details
000 -LEADER
fixed length control field 03639nab a22005057a 4500
001 - CONTROL NUMBER
control field G79598
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20220623225954.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 211028s2004 gw |||p|op||| 00| 0 eng d
022 ## - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 1432-2242 (Online)
022 ## - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 0040-5752
024 8# - OTHER STANDARD IDENTIFIER
Standard number or code https://doi.org/10.1007/s00122-004-1626-8
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
041 ## - LANGUAGE CODE
Language code of text/sound track or separate title eng
072 #0 - SUBJECT CATEGORY CODE
Subject category code A50
072 #0 - SUBJECT CATEGORY CODE
Subject category code F30
090 ## - LOCALLY ASSIGNED LC-TYPE CALL NUMBER (OCLC); LOCAL CALL NUMBER (RLIN)
Classification number (OCLC) (R) ; Classification number, CALL (RLIN) (NR) CIS-4048
100 1# - MAIN ENTRY--PERSONAL NAME
9 (RLIN) 839
Personal name George, M.L.C.
Miscellaneous information Research & Partnership Program
Field link and sequence number INT2451
245 10 - TITLE STATEMENT
Title Molecular characterization of Asian maize inbred lines by multiple laboratories
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Place of publication, distribution, etc. Berlin (Germany) :
Name of publisher, distributor, etc. Springer,
Date of publication, distribution, etc. 2004.
340 ## - PHYSICAL MEDIUM
Material base and configuration Computer File
500 ## - GENERAL NOTE
General note Peer review
500 ## - GENERAL NOTE
General note Peer-review: Yes - Open Access: Yes|http://science.thomsonreuters.com/cgi-bin/jrnlst/jlresults.cgi?PC=MASTER&ISSN=0040-5752
520 ## - SUMMARY, ETC.
Summary, etc. This study focuses on the standardization of techniques across laboratories to enable multiple datasets to be compared and combined in order to obtain reliable and robust wide-scale patterns of diversity. A set of protocols using a core collection of simple sequence repeat (SSR) markers, reference lines and standard alleles, plus a common system of allele nomenclature, was adopted in the study of maize genetic diversity in a network of laboratories in Asia. Pair-wise allele comparisons of the reference lines, done to assess the general agreement between datasets from four laboratories, showed error rates (raw) ranging from 5.8% to 9.7%, which were reduced to less than 8% after adjustments of correctable errors, and further reduced to less than 6% after the exclusion of all markers with greater than 10% individual error rates. Overall, 45% of the total mismatches were due to frameshift errors, 39% to wrong allele size, 15% to failed amplification and 1% to extra alleles. Higher genetic similarity values of the reference lines were achieved using fewer markers with data of higher quality rather than with more markers of questionable quality. Cluster analysis of the merged datasets showed the lines from southern China to be highly diverse, falling into six of the seven clusters observed and all well represented by tester lines. The lines from Indonesia fell into five of six groups, with two main groups represented by tester lines. The CIMMYT lines developed for the Asian region showed a relatively narrow genetic base, falling in two out of seven and in three out of six clusters in China and Indonesia, respectively. In contrast to the case in southern China where 95% of the lines clustered separately from the CIMMYT lines, lines in the Indonesian breeding program show a closer relationship with the CIMMYT lines, reflecting a long history of germplasm exchange.
536 ## - FUNDING INFORMATION NOTE
Text of note Research and Partnership Program
546 ## - LANGUAGE NOTE
Language note Text in English
591 ## - CATALOGING NOTES
Affiliation 0406|Springer|AL-Maize Program
594 ## - STAFFID
StaffID INT2451
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Cross-breeding
Source of heading or term AGROVOC
9 (RLIN) 26603
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Inbred lines
9 (RLIN) 1155
Source of heading or term AGROVOC
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Maize
9 (RLIN) 1173
Source of heading or term AGROVOC
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Molecular genetics
Source of heading or term AGROVOC
9 (RLIN) 3444
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Microsatellites
Source of heading or term AGROVOC
9 (RLIN) 2261
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Regalado, E.
9 (RLIN) 22023
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Li, W.
9 (RLIN) 24468
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name Moju Cao
9 (RLIN) 6534
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Dahlan, M.
9 (RLIN) 24469
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Pabendon, M.
9 (RLIN) 24470
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Warburton, M.L.
9 (RLIN) 4138
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name Xianchun Xia
9 (RLIN) 377
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Hoisington, D.
9 (RLIN) 3643
773 0# - HOST ITEM ENTRY
Title Theoretical and Applied Genetics
Note 629960
Related parts v. 109, no. 1, p. 80-91
Record control number G444762
Place, publisher, and date of publication Berlin (Germany) : Springer, 2004.
International Standard Serial Number 0040-5752
856 4# - ELECTRONIC LOCATION AND ACCESS
Link text Access only for CIMMYT Staff
Uniform Resource Identifier https://hdl.handle.net/20.500.12665/986
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Koha item type Article
Source of classification or shelving scheme Dewey Decimal Classification
Suppress in OPAC No
Holdings
Date last seen Total Checkouts Full call number Barcode Copy number Price effective from Koha item type Lost status Source of classification or shelving scheme Damaged status Not for loan Collection code Withdrawn status Home library Current library Date acquired
02/10/2015   CIS-4048 629960 1 02/10/2015 Article Not Lost Dewey Decimal Classification     CIMMYT Staff Publications Collection   CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 02/10/2015

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