000 03286npm a22004817a 4500
001 G98722
003 MX-TxCIM
005 20190927225228.0
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040 _aMX-TxCIM
082 _aCIS-7477
100 1 _aArnaud, E.
245 1 0 _aCrop ontology :
_ba resource for enabling access to breeders' data
260 _c2014.
_aSan Diego (USA) :
_bFAO ;
_bCGIAR ;
_bCIMMYT ;
_bCIAT,
300 _a58 slides
500 _aOpen Access
500 _aPresented in Plant and Animal Genome (PAG) XXII; The Largest Ag-Genomics Meeting in the World; San Diego, CA (USA); 11-15 Jan 2014
520 _aThe Crop Ontology (CO) (www.cropontology.org) is a service of the Integrated Breeding Platform (IBP), Generation Challenge Programme (GCP). CO currently includes reference lists of breeders?traits with measurement methods and scales for 14 crops ? with work ongoing to add barley, lentil and sweet potato ? as well as environmental and experimental design concepts. The objective is to provide a controlled vocabulary enabling harmonized annotations of evaluation data and metadata. The crop communities of practice, coordinated by the Crop Lead Centers, validate the concepts compiled in the CO trait dictionary template. CO trait concepts are cross-referenced to Plant Ontology (PO) and Trait Ontology (TO). The environmental and trial management concepts will be improved by a group of experts in agronomy and crop modelling. The Integrated Breeding Fieldbook and the Chado schema of the GCP crop databases both use the CO concepts for the capture and annotation of breeders?data. The Programmatic Application Interface (API) of CO enables direct download of the concepts by third-party web sites like: the international cassava database (http://www.cassavabase.org/), the Global Agricultural Trial Repository (Agtrials) (http://agtrials.org/), Eu-Solanaceae database at Wageningen University (https://www.eu-sol.wur.nl/), and the Phenomics Ontology Driven Database (PODD:http://150.229.2.236/podd/about) of the Australian Plant Phenomics Facility (APPF). CO is available in RDF format (Resource Description Framework) using the SKOS vocabulary (Simple Knowledge Organization System) for the purpose of publishing it in the Linked Open Data (LOD) Cloud. CO will be aligned with the AGROVOC thesaurus
536 _aGenetic Resources Program
536 _aIntegrated Breeding Platform
536 _aConservation Agriculture Program
546 _aText in english
594 _aINT2832
594 _aINT2912
594 _aCAKA01
594 _aCMCG01
594 _aINT3087
700 1 _aMatteis, L.
_92571
700 1 _aLaporte, M.A.
_92572
700 1 _aEspinosa, H.
_92573
700 1 _92574
_aHyman, G.
700 1 _aChibon, P.Y.
_92575
700 1 _92576
_aDevare, M.
700 1 _aWhite, J.W.
_91789
700 1 _aWilkinson, M.
_92577
700 1 _aCaracciolo, C.,
_ecoaut.
700 1 _aCelli, F.,
_ecoaut.
700 1 _9872
_aPortugal, A.
_gGeneration Challenge Program
_8INT2912
700 1 _9864
_aShrestha, R.
_gGenetic Resources Program
_8INT2832
700 0 _92570
_aAkinnola Nathaniel Akintunde
_gIntegrated Breeding Platform
_8CAKA01
700 1 _92578
_aMcLaren, C.
_gIntegrated Breeding Platform
_8CMCG01
942 _cSP
_2ddc
999 _c8765
_d8765