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022 _a1664-462X (Online)
024 8 _ahttps://doi.org/10.3389/fpls.2024.1349569
040 _aMX-TxCIM
041 _aeng
100 1 _aMontesinos-Lopez, O.A.
_gGenetic Resources Program
_8I1706800
_92700
245 1 0 _aFeature engineering of environmental covariates improves plant genomic-enabled prediction
260 _bFrontiers Media S.A.,
_c2024.
_aSwitzerland :
500 _aPeer review
500 _aOpen Access
520 _aIntroduction: Because Genomic selection (GS) is a predictive methodology, it needs to guarantee high-prediction accuracies for practical implementations. However, since many factors affect the prediction performance of this methodology, its practical implementation still needs to be improved in many breeding programs. For this reason, many strategies have been explored to improve the prediction performance of this methodology. Methods: When environmental covariates are incorporated as inputs in the genomic prediction models, this information only sometimes helps increase prediction performance. For this reason, this investigation explores the use of feature engineering on the environmental covariates to enhance the prediction performance of genomic prediction models. Results and discussion: We found that across data sets, feature engineering helps reduce prediction error regarding only the inclusion of the environmental covariates without feature engineering by 761.625% across predictors. These results are very promising regarding the potential of feature engineering to enhance prediction accuracy. However, since a significant gain in prediction accuracy was observed in only some data sets, further research is required to guarantee a robust feature engineering strategy to incorporate the environmental covariates.
546 _aText in English
591 _aMontesinos-Lopez, O.A. : No CIMMYT Affiliation
650 7 _aEngineering
_2AGROVOC
_923223
650 7 _aSelection
_2AGROVOC
_94749
650 7 _aMarker-assisted selection
_2AGROVOC
_910737
650 7 _aPlant breeding
_gAGROVOC
_2
_91203
700 1 _aCrespo-Herrera, L.A.
_gGlobal Wheat Program
_8I1706538
_92608
700 1 _aSaint Pierre, C.
_gGlobal Wheat Program
_8INT2731
_9855
700 1 _aCano-Paez, B.
_929337
700 1 _aHuerta Prado, G.I.
_933473
700 1 _aMosqueda-Gonzalez, B.A.
_919441
700 1 _aRamos-Pulido, S.
_931496
700 1 _aGerard, G.S.
_81713398
_gGlobal Wheat Program
_911490
700 0 _aKhalid Alnowibet
_934425
700 1 _aFritsche-Neto, R.
_96507
700 1 _aMontesinos-Lopez, A.
_92702
700 1 _aCrossa, J.
_gGenetic Resources Program
_8CCJL01
_959
773 0 _tFrontiers in Plant Science
_gv. 15, art. 1349569
_dSwitzerland : Frontiers Media S.A., 2024.
_w56875
_x1664-462X
856 4 _yOpen Access through DSpace
_uhttps://hdl.handle.net/10883/34616
942 _cJA
_n0
_2ddc
999 _c67683
_d67675