000			03859nab|a22005177a|4500
001			65782
003			MX-TxCIM
005			20230731172212.0
008			202211s2022||||mx |||p|op||||00||0|eng|d
022			_a2223-7747 (Online)
024	8		_ahttps://doi.org/10.3390/plants11223092
040			_aMX-TxCIM
041			_aeng
100	0		_aJingtao Qu _917341
245	1	0	_aLow-density reference fingerprinting SNP dataset of CIMMYT maize lines for quality control and genetic diversity analyses
260			_bMDPI, _c2022. _aBasel (Switzerland) :
500			_aPeer review
500			_aOpen Access
520			_aCIMMYT maize lines (CMLs), which represent the tropical maize germplasm, are freely available worldwide. All currently released 615 CMLs and fourteen temperate maize inbred lines were genotyped with 180 kompetitive allele-specific PCR single nucleotide polymorphisms to develop a reference fingerprinting SNP dataset that can be used to perform quality control (QC) and genetic diversity analyses. The QC analysis identified 25 CMLs with purity, identity, or mislabeling issues. Further field observation, purification, and re-genotyping of these CMLs are required. The reference fingerprinting SNP dataset was developed for all of the currently released CMLs with 152 high-quality SNPs. The results of principal component analysis and average genetic distances between subgroups showed a clear genetic divergence between temperate and tropical maize, whereas the three tropical subgroups partially overlapped with one another. More than 99% of the pairs of CMLs had genetic distances greater than 0.30, showing their high genetic diversity, and most CMLs are distantly related. The heterotic patterns, estimated with the molecular markers, are consistent with those estimated using pedigree information in two major maize breeding programs at CIMMYT. These research findings are helpful for ensuring the regeneration and distribution of the true CMLs, via QC analysis, and for facilitating the effective utilization of the CMLs, globally.
546			_aText in English
591			_aJingtao Qu : Not in IRS staff list but CIMMYT Affiliation
610	2	7	_9978 _aCentro Internacional de Mejoramiento de Maiz y Trigo (CIMMYT)
650		7	_aHeterotic groups _2AGROVOC _929280
650		7	_aQuality control _2AGROVOC _91232
650		0	_aSingle nucleotide polymorphisms _gAGROVOC _910805
650		7	_aMaize _2AGROVOC _91173
650		7	_aData _2AGROVOC _99002
700	1		_aChassaigne, A.A. _gGlobal Maize Program _gGenetic Resources Program _8I1705962 _9794
700	0		_aFengling Fu _928258
700	0		_aHaoqiang Yu _928259
700	1		_aDreher, K.A. _8I1706147 _9808 _gGenetic Resources Program
700	1		_aNair, S.K. _8INT3232 _91434 _gGlobal Maize Program
700	1		_aGowda, M. _8I1705963 _9795 _gGlobal Maize Program
700	1		_aBeyene, Y. _8INT2891 _9870 _gGlobal Maize Program
700	1		_aMakumbi, D. _8INT2765 _9858 _gGlobal Maize Program
700	1		_aDhliwayo, T. _8INT3355 _9935 _gGlobal Maize Program
700	1		_aSan Vicente, F.M. _8INT3035 _9884 _gGlobal Maize Program
700	1		_aOlsen, M. _8INT3333 _9923 _gGlobal Maize Program
700	1		_aPrasanna, B.M. _8INT3057 _9887 _gGlobal Maize Program
700	0		_aWanchen Li _924648
700	0		_aXuecai Zhang _gGlobal Maize Program _8INT3400 _9951
773	0		_tPlants _gv. 11, no. 22, art. 3092 _dBasel (Switzerland) : MDPI, 2022. _x2223-7747
856			_yOpen Access through DSpace _uhttps://hdl.handle.net/10883/22329
942			_cJA _n0 _2ddc
999			_c65782 _d65774