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001 65174
003 MX-TxCIM
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022 _a0040-5752
022 _a1432-2242 (Online)
024 8 _ahttps://doi.org/10.1007/s00122-022-04085-0
040 _aMX-TxCIM
041 _aeng
100 1 _aAtanda, A.S.
_8001711295
_8001712571
_98531
_gGlobal Maize Program
_gFormerly Global Wheat Program
245 1 1 _aSparse testing using genomic prediction improves selection for breeding targets in elite spring wheat
260 _bSpringer,
_c2022.
_aBerlin (Germany) :
500 _aPeer review
520 _aKey message: Sparse testing using genomic prediction can be efficiently used to increase the number of testing environments while maintaining selection intensity in the early yield testing stage without increasing the breeding budget. Abstract: Sparse testing using genomic prediction enables expanded use of selection environments in early-stage yield testing without increasing phenotyping cost. We evaluated different sparse testing strategies in the yield testing stage of a CIMMYT spring wheat breeding pipeline characterized by multiple populations each with small family sizes of 1–9 individuals. Our results indicated that a substantial overlap between lines across environments should be used to achieve optimal prediction accuracy. As sparse testing leverages information generated within and across environments, the genetic correlations between environments and genomic relationships of lines across environments were the main drivers of prediction accuracy in multi-environment yield trials. Including information from previous evaluation years did not consistently improve the prediction performance. Genomic best linear unbiased prediction was found to be the best predictor of true breeding value, and therefore, we propose that it should be used as a selection decision metric in the early yield testing stages. We also propose it as a proxy for assessing prediction performance to mirror breeder’s advancement decisions in a breeding program so that it can be readily applied for advancement decisions by breeding programs.
546 _aText in English
650 7 _aGenes
_2AGROVOC
_93563
650 7 _aBreeding programmes
_2AGROVOC
_921704
650 7 _aGenomics
_91132
_2AGROVOC
650 7 _aAccuracy
_2AGROVOC
_927100
650 7 _aEnvironment
_2AGROVOC
_91098
650 7 _aSpring wheat
_2AGROVOC
_91806
650 7 _aForecasting
_2AGROVOC
_92701
700 1 _aVelu, G.
_8INT2983
_9880
_gGlobal Wheat Program
700 1 _aSingh, R.P.
_8INT0610
_9825
_gGlobal Wheat Program
700 1 _aRobbins, K.
_95987
700 1 _aCrossa, J.
_gGenetic Resources Program
_8CCJL01
_959
700 1 _aBentley, A.R.
_8001712492
_gFormerly Global Wheat Program
_99599
773 0 _tTheoretical and Applied Genetics
_dBerlin (Germany) : Springer, 2022
_x0040-5752
_gv 135, no. 6, p. 1939–1950
_wG444762
856 _yOpen Access through DSpace
_uhttps://hdl.handle.net/10883/22045
942 _cJA
_n0
_2ddc
999 _c65174
_d65166