000 | 02951nab a22003977a 4500 | ||
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999 |
_c59909 _d59901 |
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001 | 59909 | ||
003 | MX-TxCIM | ||
005 | 20240919020950.0 | ||
008 | 190115s2019 uk |||po|p|||||0| 00eng d | ||
022 | _a1365-2540 (Online) | ||
024 | 8 | _ahttps://doi.org/10.1038/s41437-018-0109-7 | |
040 | _aMX-TxCIM | ||
041 | _aeng | ||
100 | 1 |
_92700 _aMontesinos-Lopez, O.A. |
|
245 | 1 | 2 | _aA singular value decomposition Bayesian multiple-trait and multiple-environment genomic model |
260 |
_aUnited Kingdom : _bSpringer, _c2019. |
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500 | _aPeer review | ||
500 | _aOpen Access | ||
520 | _aToday, breeders perform genomic-assisted breeding to improve more than one trait. However, frequently there are several traits under study at one time, and the implementation of current genomic multiple-trait and multiple-environment models is challenging. Consequently, we propose a four-stage analysis for multiple-trait data in this paper. In the first stage, we perform singular value decomposition (SVD) on the resulting matrix of trait responses; in the second stage, we perform multiple trait analysis on transformed responses. In stages three and four, we collect and transform the traits back to their original state and obtain the parameter estimates and the predictions on these scale variables prior to transformation. The results of the proposed method are compared, in terms of parameter estimation and prediction accuracy, with the results of the Bayesian multiple-trait and multiple-environment model (BMTME) previously described in the literature. We found that the proposed method based on SVD produced similar results, in terms of parameter estimation and prediction accuracy, to those obtained with the BMTME model. Moreover, the proposed multiple-trait method is atractive because it can be implemented using current single-trait genomic prediction software, which yields a more efficient algorithm in terms of computation. | ||
526 |
_aWC _cFP2 _cFP3 |
||
546 | _aText in English | ||
650 | 7 |
_2AGROVOC _94013 _aBayesian theory |
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650 | 7 |
_2AGROVOC _91132 _aGenomics |
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650 | 7 |
_aBreeding _gAGROVOC _2 _91029 |
|
650 | 7 |
_2AGROVOC _98703 _aBioinformatics |
|
700 | 1 |
_92702 _aMontesinos-Lopez, A. |
|
700 | 1 |
_aCrossa, J. _gGenetic Resources Program _8CCJL01 _959 |
|
700 | 0 |
_98260 _aKismiantini |
|
700 | 1 |
_98261 _aRamirez-Alcaraz, J.M. |
|
700 | 1 |
_aSingh, R.P. _gGlobal Wheat Program _8INT0610 _9825 |
|
700 | 1 |
_aMondal, S. _gFormerly Global Wheat Program _8INT3211 _9904 |
|
700 | 1 |
_aJULIANA P. _8001710082 _gFormerly Global Wheat Program _gFormerly BISA _92690 |
|
773 | 0 |
_gv. 122, p. 381-401 _tHeredity _w444336 _x1365-2540 _dUnited Kingdom : Springer, 2019. |
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856 | 4 |
_yOpen Access through DSpace _uhttps://hdl.handle.net/10883/19788 |
|
942 |
_2ddc _cJA _n0 |