000 | 02974nab a22003497a 4500 | ||
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001 | G94654 | ||
003 | MX-TxCIM | ||
005 | 20230714230751.0 | ||
008 | 210805t2010 ii |||p|op||| 00| 0 eng d | ||
022 | 0 | _a0019-6363 | |
040 | _aMX-TxCIM | ||
041 | _aeng | ||
090 | _aCIS-6191 | ||
100 | 1 |
_aPrasanna, B.M. _gGlobal Maize Program _8INT3057 _9887 |
|
245 | 1 | 0 |
_aStatistical genomics for crop improvement : _bopportunities and challenges |
260 |
_aIndia : _bIndian Society of Agricultural Statistics, _c2010. |
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500 | _aPeer review | ||
500 | _aPeer-review: No - Open Access: Yes|http://www.isas.org.in/html/journal.html | ||
520 | _aEffective analysis of molecular data in combination with rigorous phenotypic data using appropriate statistical methods can provide enhanced understanding of the genetic and molecular bases of complex phenotypic traits. Coupled with the rapid development related to genome sequencing of crop plants, advances in statistical methods have aided in detecting Quantitative Trait Loci (QTL) influencing an array of traits, including epistatic QTLs, besides analysis of genotype x environment interactions, discovery of 'consensus QTL' through meta-analysis of data, expression-QTL (eQTL) through genetical genomics, and even epigenomic QTL. The profusion of powerful DNA-based markers, particularly single nucleotide polymorphisms (SNPs) and the evolution of statistical algorithms and experimental strategies, including the extension of the concept of linkage disequilibrium (LD)-based association mapping in crop plants, further promises to revolutionize the discovery of marker-trait associations for several important traits. While these exciting advances have brought closer the statisticians, bioinformatics experts, geneticists and molecular biologists, the new focus on genomiscs has also highlighted a significant challenge; how to integrate the different views of the genome given by various types of experimental data and provide a proper biological perspective that can lead to crop improvement. In the article, from the user's perspective, I shall review some of the ongoing work on the above-mentioned areas in crop plants, especially using maize as a model system, and the opportunities and challenges for application of statistical genomics in molecular plant breeding. | ||
536 | _aGlobal Maize Program | ||
546 | _aText in English | ||
594 | _aINT3057 | ||
650 | 7 |
_aGenetic markers _2AGROVOC _91848 |
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650 | 7 |
_aQuantitative Trait Loci _2AGROVOC _91853 |
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650 | 7 |
_aChromosome mapping _2AGROVOC _92084 |
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650 | 7 |
_aGenomics _2AGROVOC _91132 |
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650 | 7 |
_aStatistical methods _2AGROVOC _92624 |
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650 | 7 |
_aCrops _2AGROVOC _91069 |
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773 | 0 |
_tJournal of the Indian Society of Agricultural Statistics _gv. 64, no. 1, p. 77-87 _dIndia : Indian Society of Agricultural Statistics, 2010. _x0019-6363 |
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856 | 4 |
_yAccess only for CIMMYT Staff _uhttps://hdl.handle.net/20.500.12665/379 |
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942 |
_cJA _2ddc _n0 |
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999 |
_c28326 _d28326 |