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Allelic variants at the TaZds-D1 locus on wheat chromosome 2DL and their association with yellow pigment content

By: Contributor(s): Material type: ArticleArticleLanguage: English Publication details: USA : CSSA : Wiley, 2011.ISSN:
  • 1435-0653 (Revista en electrónico)
  • 0011-183X
Subject(s): Online resources: In: Crop Science v. 51, no. 4, p. 1580-1590Summary: Zeta (ζ)-carotene desaturase (ZDS) is a key enzyme in the carotenoid biosynthetic pathway, which determines the yellow pigment (YP) content in wheat (Triticum aestivum L.) grains. In the present study, the full-length DNA sequence of a ZDS gene on wheat chromosome 2DL, designated TaZds-D1, was characterized. The TaZds-D1 gene has an open reading frame of 1707 bp, including 13 introns and 14 exons, and a deduced peptide containing 568 amino acid residues with a predicted molecular weight of 62.5 kDa. The TaZds-D1 gene was located on chromosome 2DL based on polymerase chain reaction amplifications of Chinese Spring nullisomic-tetrasomic lines, Langdon–Chinese Spring D-genome chromosome disomic substitution lines, and Rusty D-genome chromosome disomic substitution lines as well as linkage analysis. Two allelic variants, TaZds-D1a and TaZds-D1b, were detected in Chinese wheat cultivars, and a functional marker, YP2D-1, was developed based on the sequence polymorphism between TaZds-D1a and TaZds-D1b. A major quantitative trait locus, located at the TaZds-D1 region in the marker interval of YP2D-1 and Xgwm157 on chromosome 2DL, explained 18.4% of the phenotypic variance for YP content in a doubled haploid population derived from the cross Zhongyou 9507/CA 9632. This confirmed the association between allelic variation at the TaZds-D1 locus and YP content.
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Item type Current library Collection Call number Status Date due Barcode Item holds
Article CIMMYT Knowledge Center: John Woolston Library CIMMYT Staff Publications Collection CIS-6628 (Browse shelf(Opens below)) Available
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Peer review

Peer-review: Yes - Open Access: Yes|http://science.thomsonreuters.com/cgi-bin/jrnlst/jlresults.cgi?PC=MASTER&ISSN=0011-183X

Zeta (ζ)-carotene desaturase (ZDS) is a key enzyme in the carotenoid biosynthetic pathway, which determines the yellow pigment (YP) content in wheat (Triticum aestivum L.) grains. In the present study, the full-length DNA sequence of a ZDS gene on wheat chromosome 2DL, designated TaZds-D1, was characterized. The TaZds-D1 gene has an open reading frame of 1707 bp, including 13 introns and 14 exons, and a deduced peptide containing 568 amino acid residues with a predicted molecular weight of 62.5 kDa. The TaZds-D1 gene was located on chromosome 2DL based on polymerase chain reaction amplifications of Chinese Spring nullisomic-tetrasomic lines, Langdon–Chinese Spring D-genome chromosome disomic substitution lines, and Rusty D-genome chromosome disomic substitution lines as well as linkage analysis. Two allelic variants, TaZds-D1a and TaZds-D1b, were detected in Chinese wheat cultivars, and a functional marker, YP2D-1, was developed based on the sequence polymorphism between TaZds-D1a and TaZds-D1b. A major quantitative trait locus, located at the TaZds-D1 region in the marker interval of YP2D-1 and Xgwm157 on chromosome 2DL, explained 18.4% of the phenotypic variance for YP content in a doubled haploid population derived from the cross Zhongyou 9507/CA 9632. This confirmed the association between allelic variation at the TaZds-D1 locus and YP content.

Global Wheat Program

Text in English

Crop Science Society of America (CSSA)

INT2411|INT3297|INT2411

CIMMYT Staff Publications Collection

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