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Assessing morphological and genetic variation in annatto (Bixa orellana L.) by sequence-related amplified polymorphism and cluster analysis

By: Contributor(s): Material type: ArticleArticleLanguage: English Publication details: USA : American Society for Horticultural Science, 2008.ISSN:
  • 0018-5345
  • 2327-9834 (Online)
Subject(s): Online resources: In: HortScience v. 43, no. 7, p. 2013-2017635347Summary: Annatto (Bixa orellana L.) is the sole source of bixin, a seed-specific red apocarotenoid pigment used worldwide. Genetic improvement of annatto has focused on increasing bixin content as well as fostering traits that favor higher content such as pod indehiscence and flower color, among others. Eighty-seven samples collected from two separate important agricultural regions of the southeast of Mexico were characterized morphologically and analyzed genetically for the first time. The sequence-related amplified polymorphism was used for genetic analysis. Two-step cluster analysis of the individuals based on morphological traits produced three groups: one containing individuals with desired morphological characteristics and two others with complementary traits. Like the morphological analysis, the genetic analysis indicated high genetic variation, although the dendrogram based on Nei and Li's similarity coefficient showed them to be dispersed by collection site. However, calculated similarity index values indicated all individuals exhibited high genetic variation. The results are an important advance toward a more effective genetic improvement of annatto because crosses between the different morphological and/or genetic groups described here have the potential to produce a recombination of desired traits in hybrid offspring.
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Item type Current library Collection Call number Copy number Status Date due Barcode Item holds
Article CIMMYT Knowledge Center: John Woolston Library CIMMYT Staff Publications Collection CIS-5391 (Browse shelf(Opens below)) 1 Available 635347
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Peer review

Peer-review: Yes - Open Access: Yes|http://science.thomsonreuters.com/cgi-bin/jrnlst/jlresults.cgi?PC=MASTER&ISSN=0018-5345

Annatto (Bixa orellana L.) is the sole source of bixin, a seed-specific red apocarotenoid pigment used worldwide. Genetic improvement of annatto has focused on increasing bixin content as well as fostering traits that favor higher content such as pod indehiscence and flower color, among others. Eighty-seven samples collected from two separate important agricultural regions of the southeast of Mexico were characterized morphologically and analyzed genetically for the first time. The sequence-related amplified polymorphism was used for genetic analysis. Two-step cluster analysis of the individuals based on morphological traits produced three groups: one containing individuals with desired morphological characteristics and two others with complementary traits. Like the morphological analysis, the genetic analysis indicated high genetic variation, although the dendrogram based on Nei and Li's similarity coefficient showed them to be dispersed by collection site. However, calculated similarity index values indicated all individuals exhibited high genetic variation. The results are an important advance toward a more effective genetic improvement of annatto because crosses between the different morphological and/or genetic groups described here have the potential to produce a recombination of desired traits in hybrid offspring.

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