Normal view MARC view ISBD view

Identifying subsets of maize accessions by three-mode principal component analysis

By: Rincón Sánchez, F.
Contributor(s): Johnson, B [coaut.] | Taba, S [coaut.] | Crossa, J [coaut.].
Material type: materialTypeLabelArticlePublisher: 1997ISSN: 1435-0653 (Revista en electrónico).Subject(s): Analysis | Caribbean | Germplasm | Identification | Latin America | Maize | Research projects | Statistical analysis | Varieties | CIMMYT | Zea mays AGROVOC | Plant breeding AGROVOC In: Crop Science v. 37, no. 6, p. 1936-1943Summary: Genebank accessions are a potential source of genetic variability for maize (Zea mays L.) breeding programs. Identification of useful individual entries is commonly based on the expression of one or more attributes in different sites or environments. This study was motivated by the need to identify a subset of Caribbean accessions for introgression into elite germplasm of the western Corn Belt. Thus the objective,vas to identify potentially useful Caribbean accessions, based on (i) simultaneous consideration of six agronomic attributes deemed economically important for the western Corn Belt, and (ii) response patterns observed across four sharply contrasting environments. Both (i) and (ii) were addressed by means of three-mode principal component analysis (PCA) of data on six agronomic and morphological attributes for 184 Caribbean maize accessions evaluated at four environments. Three-way data were analyzed by three-mode PCA, and based on (i) and (ii), two joint plots were generated. From the PCA and joint plots, two subsets of accessions were identified. First, a subset of 14 accessions having good yield, intermediate plant height, and average days to anthesis was identified. Secondly, a subset of 10 accessions having average performance over all environments was identified. Two accessions were common to both subsets. Jointly, the two approaches produced a combined subset of 22 accessions, representing 12% of the total evaluated, and including representatives of 11 maize races. Three-mode PCA integrated information on accessions, attributes, and environments, and provided a means of simultaneously visualizing these three types of information. Three-mode PCA can complement standard methodologies used by plant breeders for identification of potentially useful accessions in introgression programs.Collection: CIMMYT Staff Publications CollectionCollection: Serials Collection
Tags from this library: No tags from this library for this title. Log in to add tags.
    average rating: 0.0 (0 votes)
Item type Current location Call number Status Date due Barcode Item holds
Article CIMMYT Knowledge Center: John Woolston Library

Lic. Jose Juan Caballero Flores

 

Look under journal title (Browse shelf) Available
Total holds: 0

Peer-review: Yes - Open Access: Yes|http://science.thomsonreuters.com/cgi-bin/jrnlst/jlresults.cgi?PC=MASTER&ISSN=0011-183X

Genebank accessions are a potential source of genetic variability for maize (Zea mays L.) breeding programs. Identification of useful individual entries is commonly based on the expression of one or more attributes in different sites or environments. This study was motivated by the need to identify a subset of Caribbean accessions for introgression into elite germplasm of the western Corn Belt. Thus the objective,vas to identify potentially useful Caribbean accessions, based on (i) simultaneous consideration of six agronomic attributes deemed economically important for the western Corn Belt, and (ii) response patterns observed across four sharply contrasting environments. Both (i) and (ii) were addressed by means of three-mode principal component analysis (PCA) of data on six agronomic and morphological attributes for 184 Caribbean maize accessions evaluated at four environments. Three-way data were analyzed by three-mode PCA, and based on (i) and (ii), two joint plots were generated. From the PCA and joint plots, two subsets of accessions were identified. First, a subset of 14 accessions having good yield, intermediate plant height, and average days to anthesis was identified. Secondly, a subset of 10 accessions having average performance over all environments was identified. Two accessions were common to both subsets. Jointly, the two approaches produced a combined subset of 22 accessions, representing 12% of the total evaluated, and including representatives of 11 maize races. Three-mode PCA integrated information on accessions, attributes, and environments, and provided a means of simultaneously visualizing these three types of information. Three-mode PCA can complement standard methodologies used by plant breeders for identification of potentially useful accessions in introgression programs.

Genetic Resources Program

English

R97-98ANALY|Crop Science Society of America (CSSA)|Maria|9801|EE|anterior|Fdo|FINAL9798|1

US-UNeb 1996 RINCÓN-SÁNCHEZ D r

CCJL01

CIMMYT Staff Publications Collection

Serials Collection

There are no comments for this item.

Log in to your account to post a comment.
baner

International Maize and Wheat Improvement Center (CIMMYT) © Copyright 2015. Carretera México-Veracruz. Km. 45, El Batán, Texcoco, México, C.P. 56237.
If you have any question, please contact us at CIMMYT-Knowledge-Center@cgiar.org

Centro Internacional de Mejoramiento de Maíz y Trigo (CIMMYT) © Copyright 2015. Carretera México-Veracruz. Km. 45, El Batán, Texcoco, México, C.P. 56237.
Si tiene cualquier pregunta, contáctenos a CIMMYT-Knowledge-Center@cgiar.org