Knowledge Center Catalog

Genome-wide patterns of SNP variation in polyploid wheat (Record no. 8022)

MARC details
000 -LEADER
fixed length control field 03117nam a22004937a 4500
001 - CONTROL NUMBER
control field G94619
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20190829201642.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 121211s ||||f| 0 p|p||0|| |
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
090 ## - LOCALLY ASSIGNED LC-TYPE CALL NUMBER (OCLC); LOCAL CALL NUMBER (RLIN)
Classification number (OCLC) (R) ; Classification number, CALL (RLIN) (NR) CIS-6172
100 1# - MAIN ENTRY--PERSONAL NAME
Personal name Akhunov, E.
Affiliation International Symposium on Genomics of Plant Genetic Resources, II; Bologna (Italy); 24-27 Apr 2010
245 00 - TITLE STATEMENT
Title Genome-wide patterns of SNP variation in polyploid wheat
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Date of publication, distribution, etc. 2010
300 ## - PHYSICAL DESCRIPTION
Extent p. 46
500 ## - GENERAL NOTE
General note Abstract only
520 ## - SUMMARY, ETC.
Summary, etc. Genome-wide set of SNPs is an essential tool for linkage and association mapping of agronomic traits and studying the genetic variation in populations of cultivated crop species and their wild ancestors. Recent advances in genomic technologies including the development of highly-multiplexed genotyping assays and next-generation sequencing technologies opened new possibilities for the analysis of plant genomes. We adopted these technologies to characterize the patterns of genetic variation in tetraploid and hexaploid wheat. A panel of 480 spring and winter US wheat cultivars was genotyped using 1536-plex Illumina OPA. The SNP genotyping data was used to infer the population structure and genome-wide patterns of genetic diversity and linkage disequilibrium in a collection of wheat cultivars and to assess the utility of an assembled hexaploid wheat panel for LD mapping. A strong effect of breeding on genetic differentiation of cultivars was demonstrated. The sequence-capture and next-generation sequencing approaches were used to resequence 1 kb fragments of 3,500 genes in tetraploid wild emmer and durum wheat. More than 3,000 SNP sites were used to investigate the distribution of mutations differentiating the genomes of wild and domesticated tetraploid wheat. Our study showed that this strategy is fast and very efficient method for the targeted analysis of the regions of interest in highly complex genomes, such as polyploid wheat. The potential impact of new genomic tools on utilization of plant genetic resources for breeding will be discussed.
536 ## - FUNDING INFORMATION NOTE
Text of note Global Wheat Program
546 ## - LANGUAGE NOTE
Language note English
594 ## - STAFFID
StaffID INT2692
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 2085
Personal name Anderson, J.A.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 423
Personal name Baenziger, P.S.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Bruckner, P.L.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Campbell, K.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Carver, B.F.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Chao, S.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Chen, J.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Clark, D.R.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Dubcovsky, J.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Dvorak, J.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Glover, K.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Haley, S.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Luo, M.C.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Matnyazov, R.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Rudd, J.C.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Saintenac, C.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Sims, R.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 2094
Personal name Sorrells, M.E.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Talbert, L.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 851
Personal name Dreisigacker, S.
Miscellaneous information Global Wheat Program
Field link and sequence number INT2692
856 4# - ELECTRONIC LOCATION AND ACCESS
Link text Access only for CIMMYT Staff
Uniform Resource Identifier http://libcatalog.cimmyt.org/download/cis/G94619.pdf
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Koha item type Conference proceedings
Source of classification or shelving scheme Dewey Decimal Classification
Holdings
Date last seen Total Checkouts Full call number Price effective from Koha item type Lost status Damaged status Not for loan Collection code Withdrawn status Home library Current library Date acquired
07/10/2017   CIS-6172 07/10/2017 Conference proceedings Not Lost     CIMMYT Staff Publications Collection   CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 07/10/2017

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