Genome-wide patterns of SNP variation in polyploid wheat (Record no. 8022)
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000 -LEADER | |
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fixed length control field | 03117nam a22004937a 4500 |
001 - CONTROL NUMBER | |
control field | G94619 |
003 - CONTROL NUMBER IDENTIFIER | |
control field | MX-TxCIM |
005 - DATE AND TIME OF LATEST TRANSACTION | |
control field | 20190829201642.0 |
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION | |
fixed length control field | 121211s ||||f| 0 p|p||0|| | |
040 ## - CATALOGING SOURCE | |
Original cataloging agency | MX-TxCIM |
090 ## - LOCALLY ASSIGNED LC-TYPE CALL NUMBER (OCLC); LOCAL CALL NUMBER (RLIN) | |
Classification number (OCLC) (R) ; Classification number, CALL (RLIN) (NR) | CIS-6172 |
100 1# - MAIN ENTRY--PERSONAL NAME | |
Personal name | Akhunov, E. |
Affiliation | International Symposium on Genomics of Plant Genetic Resources, II; Bologna (Italy); 24-27 Apr 2010 |
245 00 - TITLE STATEMENT | |
Title | Genome-wide patterns of SNP variation in polyploid wheat |
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT) | |
Date of publication, distribution, etc. | 2010 |
300 ## - PHYSICAL DESCRIPTION | |
Extent | p. 46 |
500 ## - GENERAL NOTE | |
General note | Abstract only |
520 ## - SUMMARY, ETC. | |
Summary, etc. | Genome-wide set of SNPs is an essential tool for linkage and association mapping of agronomic traits and studying the genetic variation in populations of cultivated crop species and their wild ancestors. Recent advances in genomic technologies including the development of highly-multiplexed genotyping assays and next-generation sequencing technologies opened new possibilities for the analysis of plant genomes. We adopted these technologies to characterize the patterns of genetic variation in tetraploid and hexaploid wheat. A panel of 480 spring and winter US wheat cultivars was genotyped using 1536-plex Illumina OPA. The SNP genotyping data was used to infer the population structure and genome-wide patterns of genetic diversity and linkage disequilibrium in a collection of wheat cultivars and to assess the utility of an assembled hexaploid wheat panel for LD mapping. A strong effect of breeding on genetic differentiation of cultivars was demonstrated. The sequence-capture and next-generation sequencing approaches were used to resequence 1 kb fragments of 3,500 genes in tetraploid wild emmer and durum wheat. More than 3,000 SNP sites were used to investigate the distribution of mutations differentiating the genomes of wild and domesticated tetraploid wheat. Our study showed that this strategy is fast and very efficient method for the targeted analysis of the regions of interest in highly complex genomes, such as polyploid wheat. The potential impact of new genomic tools on utilization of plant genetic resources for breeding will be discussed. |
536 ## - FUNDING INFORMATION NOTE | |
Text of note | Global Wheat Program |
546 ## - LANGUAGE NOTE | |
Language note | English |
594 ## - STAFFID | |
StaffID | INT2692 |
700 1# - ADDED ENTRY--PERSONAL NAME | |
9 (RLIN) | 2085 |
Personal name | Anderson, J.A. |
700 1# - ADDED ENTRY--PERSONAL NAME | |
9 (RLIN) | 423 |
Personal name | Baenziger, P.S. |
700 1# - ADDED ENTRY--PERSONAL NAME | |
Personal name | Bruckner, P.L., |
Relator term | coaut. |
700 1# - ADDED ENTRY--PERSONAL NAME | |
Personal name | Campbell, K., |
Relator term | coaut. |
700 1# - ADDED ENTRY--PERSONAL NAME | |
Personal name | Carver, B.F., |
Relator term | coaut. |
700 1# - ADDED ENTRY--PERSONAL NAME | |
Personal name | Chao, S., |
Relator term | coaut. |
700 1# - ADDED ENTRY--PERSONAL NAME | |
Personal name | Chen, J., |
Relator term | coaut. |
700 1# - ADDED ENTRY--PERSONAL NAME | |
Personal name | Clark, D.R., |
Relator term | coaut. |
700 1# - ADDED ENTRY--PERSONAL NAME | |
Personal name | Dubcovsky, J., |
Relator term | coaut. |
700 1# - ADDED ENTRY--PERSONAL NAME | |
Personal name | Dvorak, J., |
Relator term | coaut. |
700 1# - ADDED ENTRY--PERSONAL NAME | |
Personal name | Glover, K., |
Relator term | coaut. |
700 1# - ADDED ENTRY--PERSONAL NAME | |
Personal name | Haley, S., |
Relator term | coaut. |
700 1# - ADDED ENTRY--PERSONAL NAME | |
Personal name | Luo, M.C., |
Relator term | coaut. |
700 1# - ADDED ENTRY--PERSONAL NAME | |
Personal name | Matnyazov, R., |
Relator term | coaut. |
700 1# - ADDED ENTRY--PERSONAL NAME | |
Personal name | Rudd, J.C., |
Relator term | coaut. |
700 1# - ADDED ENTRY--PERSONAL NAME | |
Personal name | Saintenac, C., |
Relator term | coaut. |
700 1# - ADDED ENTRY--PERSONAL NAME | |
Personal name | Sims, R., |
Relator term | coaut. |
700 1# - ADDED ENTRY--PERSONAL NAME | |
9 (RLIN) | 2094 |
Personal name | Sorrells, M.E. |
700 1# - ADDED ENTRY--PERSONAL NAME | |
Personal name | Talbert, L., |
Relator term | coaut. |
700 1# - ADDED ENTRY--PERSONAL NAME | |
9 (RLIN) | 851 |
Personal name | Dreisigacker, S. |
Miscellaneous information | Global Wheat Program |
Field link and sequence number | INT2692 |
856 4# - ELECTRONIC LOCATION AND ACCESS | |
Link text | Access only for CIMMYT Staff |
Uniform Resource Identifier | http://libcatalog.cimmyt.org/download/cis/G94619.pdf |
942 ## - ADDED ENTRY ELEMENTS (KOHA) | |
Koha item type | Conference proceedings |
Source of classification or shelving scheme | Dewey Decimal Classification |
Date last seen | Total Checkouts | Full call number | Price effective from | Koha item type | Lost status | Damaged status | Not for loan | Collection code | Withdrawn status | Home library | Current library | Date acquired |
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07/10/2017 | CIS-6172 | 07/10/2017 | Conference proceedings | Not Lost | CIMMYT Staff Publications Collection | CIMMYT Knowledge Center: John Woolston Library | CIMMYT Knowledge Center: John Woolston Library | 07/10/2017 |