Knowledge Center Catalog

Transcriptomic analysis to understand the nitrogen stress response mechanism in BNI-enabled wheat (Record no. 68875)

MARC details
000 -LEADER
fixed length control field 03363nab|a22004337a|4500
001 - CONTROL NUMBER
control field 68875
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20251223151608.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 250604s2025 s ||||| |||| 00| 0 eng d
022 ## - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 1661-6596
024 8# - OTHER STANDARD IDENTIFIER
Standard number or code https://doi.org/10.3390/ijms26104610
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
041 ## - LANGUAGE CODE
Language code of text/sound track or separate title eng
100 1# - MAIN ENTRY--PERSONAL NAME
Personal name Mishra, C.N.
9 (RLIN) 14669
245 10 - TITLE STATEMENT
Title Transcriptomic analysis to understand the nitrogen stress response mechanism in BNI-enabled wheat
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Place of publication, distribution, etc. Basel (Switzerland) :
Name of publisher, distributor, etc. MDPI,
Date of publication, distribution, etc. 2025.
500 ## - GENERAL NOTE
General note Open Access
500 ## - GENERAL NOTE
General note Peer review
520 ## - SUMMARY, ETC.
Summary, etc. A comparative transcriptomic analysis was conducted for the nitrogen-efficient (BNI-Munal) and derivative parent Munal wheat genotypes to unravel the gene expression patterns across four nitrogen levels (0%, 50%, 75%, and 100%). Analyzing the genes of BNI-enabled wheat helps us understand how they are expressed differently, which heavily influences BNI activity. Grain yield and 1000-grain weight were higher in BNI Munal than in Munal. All the other traits were similar in performance. Varying nitrogen dosages led to significant differences in gene expression patterns between the two genotypes. Genes related to binding and catalytic activity were prevalent among molecular functions, while genes corresponding to cellular anatomical entities dominated the cellular component category. Differential expression was observed in 371 genes at 0%N, 261 genes at 50%N, 303 genes at 75%N, and 736 genes at 100%N. Five unigenes (three upregulated and two downregulated) were consistently expressed across all nitrogen levels. Further analysis of upregulated unigenes identified links to the NrpA gene (involved in nitrogen regulation), tetratricopeptide repeat-containing protein (PPR), and cytokinin dehydrogenase 2. Analysis of downregulated genes pointed to associations with the Triticum aestivum 3BS-specific BAC library, which encodes the NPF (Nitrate and Peptide Transporter Family) and the TaVRN gene family (closely related to the TaNUE1 gene). The five unigenes and one unigene highlighted in the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways were validated in Munal and BNI Munal. The results obtained will enhance our understanding about gene expression patterns across different nitrogen levels in BNI wheat and help us breed wheat varieties with the BNI trait for improved NUE.
546 ## - LANGUAGE NOTE
Language note Text in English
597 ## - CGIAR Initiative
Donor or Funder Japan International Cooperation Agency (JICA)
Program & Accelerators Breeding for Tomorrow
CGSpace handle https://hdl.handle.net/10568/179272
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Nitrification inhibitors
Source of heading or term AGROVOC
9 (RLIN) 4939
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Transcriptomics
Source of heading or term AGROVOC
9 (RLIN) 30116
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Genes
Source of heading or term AGROVOC
9 (RLIN) 3563
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Wheat
Source of heading or term AGROVOC
9 (RLIN) 1310
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name Sushma Kumari Pawar
9 (RLIN) 37653
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Sharma, S.
9 (RLIN) 37652
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Thakur, A.
9 (RLIN) 39066
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name Sabhyata
9 (RLIN) 37654
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Mishra, S.
9 (RLIN) 39067
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name Satish Kumar
9 (RLIN) 7883
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name Om Prakash Gupta
9 (RLIN) 28835
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Joshi, A.K.
Miscellaneous information Global Wheat Program
-- Formerly Borlaug Institute for South Asia
Field link and sequence number INT2917
9 (RLIN) 873
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Tiwari, R.
9 (RLIN) 9681
773 0# - HOST ITEM ENTRY
Title International Journal of Molecular Sciences
Related parts v. 26, no. 10, art. 4610
Place, publisher, and date of publication Basel (Switzerland) : MDPI, 2025.
International Standard Serial Number 1661-6596
856 4# - ELECTRONIC LOCATION AND ACCESS
Link text Open Access through DSpace
Uniform Resource Identifier https://hdl.handle.net/10883/35709
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Koha item type Article
Suppress in OPAC No
Source of classification or shelving scheme Dewey Decimal Classification
Holdings
Date last seen Total Checkouts Price effective from Koha item type Lost status Source of classification or shelving scheme Damaged status Not for loan Collection code Withdrawn status Home library Current library Date acquired
06/03/2025   06/03/2025 Article Not Lost Dewey Decimal Classification     CIMMYT Staff Publications Collection   CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 06/03/2025

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