MARC details
| 000 -LEADER |
|---|
| fixed length control field |
03943nab|a22005537a|4500 |
| 001 - CONTROL NUMBER |
|---|
| control field |
67972 |
| 003 - CONTROL NUMBER IDENTIFIER |
|---|
| control field |
MX-TxCIM |
| 005 - DATE AND TIME OF LATEST TRANSACTION |
|---|
| control field |
20241126102554.0 |
| 008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION |
|---|
| fixed length control field |
20249s2024||||mx |||p|op||||00||0|eng|d |
| 022 ## - INTERNATIONAL STANDARD SERIAL NUMBER |
|---|
| International Standard Serial Number |
1664-8021 (Online) |
| 024 8# - OTHER STANDARD IDENTIFIER |
|---|
| Standard number or code |
https://doi.org/10.3389/fgene.2024.1431043 |
| 040 ## - CATALOGING SOURCE |
|---|
| Original cataloging agency |
MX-TxCIM |
| 041 ## - LANGUAGE CODE |
|---|
| Language code of text/sound track or separate title |
eng |
| 100 0# - MAIN ENTRY--PERSONAL NAME |
|---|
| Personal name |
Jingtao Qu |
| 9 (RLIN) |
17341 |
| 245 1# - TITLE STATEMENT |
|---|
| Title |
Genetic architecture of kernel-related traits in sweet and waxy maize revealed by genome-wide association analysis |
| 260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT) |
|---|
| Name of publisher, distributor, etc. |
Frontiers, |
| Date of publication, distribution, etc. |
2024. |
| Place of publication, distribution, etc. |
Switzerland : |
| 500 ## - GENERAL NOTE |
|---|
| General note |
Peer review |
| 520 ## - SUMMARY, ETC. |
|---|
| Summary, etc. |
Introduction Maize (Zea mays L.) is one of the most important crops worldwide, the kernel size-related traits are the major components of maize grain yield.Methods To dissect the genetic architecture of four kernel-related traits of 100-kernel weight, kernel length, kernel width, and kernel diameter, a genome-wide association study (GWAS) was conducted in the waxy and sweet maize panel comprising of 447 maize inbred lines re-sequenced at the 5x coverage depth. GWAS analysis was carried out with the mixed linear model using 1,684,029 high-quality SNP markers.Results In total, 49 SNPs significantly associated with the four kernel-related traits were identified, including 46 SNPs on chromosome 3, two SNPs on chromosome 4, and one SNP on chromosome 7. Haplotype regression analysis identified 338 haplotypes that significantly affected these four kernel-related traits. Genomic selection (GS) results revealed that a set of 10,000 SNPs and a training population size of 30% are sufficient for the application of GS in waxy and sweet maize breeding for kernel weight and kernel size. Forty candidate genes associated with the four kernel-related traits were identified, including both Zm00001d000707 and Zm00001d044139 expressed in the kernel development tissues and stages with unknown functions.Discussion These significant SNPs and important haplotypes provide valuable information for developing functional markers for the implementation of marker-assisted selection in breeding. The molecular mechanism of Zm00001d000707 and Zm00001d044139 regulating these kernel-related traits needs to be investigated further. |
| 546 ## - LANGUAGE NOTE |
|---|
| Language note |
Text in English |
| 591 ## - CATALOGING NOTES |
|---|
| Affiliation |
Jingtao Qu : Not in IRS staff list but CIMMYT Affiliation |
| 591 ## - CATALOGING NOTES |
|---|
| Affiliation |
Diansi Yu : Not in IRS staff list but CIMMYT Affiliation |
| 591 ## - CATALOGING NOTES |
|---|
| Affiliation |
Wei Gu : Not in IRS staff list but CIMMYT Affiliation |
| 591 ## - CATALOGING NOTES |
|---|
| Affiliation |
Huiyun Kuang : Not in IRS staff list but CIMMYT Affiliation |
| 591 ## - CATALOGING NOTES |
|---|
| Affiliation |
Dongdong Dang : Not in IRS staff list but CIMMYT Affiliation |
| 591 ## - CATALOGING NOTES |
|---|
| Affiliation |
Hui Wang : Not in IRS staff list but CIMMYT Affiliation |
| 591 ## - CATALOGING NOTES |
|---|
| Affiliation |
Hongjian Zheng : Not in IRS staff list but CIMMYT Affiliation |
| 591 ## - CATALOGING NOTES |
|---|
| Affiliation |
Yuan Guan : Not in IRS staff list but CIMMYT Affiliation |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| Topical term or geographic name as entry element |
Kernels |
| Source of heading or term |
AGROVOC |
| 9 (RLIN) |
1168 |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| Topical term or geographic name as entry element |
High-throughput sequencing |
| Source of heading or term |
AGROVOC |
| 9 (RLIN) |
34250 |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| Topical term or geographic name as entry element |
Genome-wide association studies |
| Source of heading or term |
AGROVOC |
| 9 (RLIN) |
31443 |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| Topical term or geographic name as entry element |
Marker-assisted selection |
| 9 (RLIN) |
10737 |
| Source of heading or term |
AGROVOC |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| Topical term or geographic name as entry element |
Maize |
| Source of heading or term |
AGROVOC |
| 9 (RLIN) |
1173 |
| 700 0# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Diansi Yu |
| 9 (RLIN) |
14215 |
| 700 0# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Wei Gu |
| 9 (RLIN) |
31610 |
| 700 0# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Muhammad Hayder Bin Khalid |
| 9 (RLIN) |
37079 |
| 700 0# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Huiyun Kuang |
| 9 (RLIN) |
37080 |
| 700 0# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Dongdong Dang |
| 9 (RLIN) |
29250 |
| 700 0# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Hui Wang |
| 9 (RLIN) |
4189 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Prasanna, B.M. |
| Miscellaneous information |
Global Maize Program |
| Field link and sequence number |
INT3057 |
| 9 (RLIN) |
887 |
| 700 0# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Xuecai Zhang |
| Miscellaneous information |
Global Maize Program |
| Field link and sequence number |
INT3400 |
| 9 (RLIN) |
951 |
| 700 0# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Ao Zhang |
| 9 (RLIN) |
5943 |
| 700 0# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Hongjian Zheng |
| 9 (RLIN) |
3423 |
| 700 0# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Yuan Guan |
| 9 (RLIN) |
10975 |
| 773 0# - HOST ITEM ENTRY |
|---|
| Title |
Frontiers in Genetics |
| Related parts |
v. 15, art. 1431043 |
| Place, publisher, and date of publication |
Switzerland : Frontiers, 2024 |
| Record control number |
58093 |
| International Standard Serial Number |
1664-8021 |
| 856 4# - ELECTRONIC LOCATION AND ACCESS |
|---|
| Link text |
Open Access through DSpace |
| Uniform Resource Identifier |
https://hdl.handle.net/10883/35004 |
| 942 ## - ADDED ENTRY ELEMENTS (KOHA) |
|---|
| Koha item type |
Article |
| Suppress in OPAC |
No |
| Source of classification or shelving scheme |
Dewey Decimal Classification |