Knowledge Center Catalog

Archetype for implementing Rapid Cycle Genomic Selection (RCGS) in CGIAR-NARES-SME breeding network pipelines : (Record no. 67496)

MARC details
000 -LEADER
fixed length control field 04893nam a22004937a 4500
001 - CONTROL NUMBER
control field 67496
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20240722190650.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 191211s2021 mx ||||| |||| 00| 0 eng d
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
041 ## - LANGUAGE CODE
Language code of text/sound track or separate title eng
100 1# - MAIN ENTRY--PERSONAL NAME
9 (RLIN) 26660
Personal name Gemenet, D.
Field link and sequence number 001712390
Relator term editor
Miscellaneous information Excellence in Breeding
245 10 - TITLE STATEMENT
Title Archetype for implementing Rapid Cycle Genomic Selection (RCGS) in CGIAR-NARES-SME breeding network pipelines :
Remainder of title Examples for pure line crops; RTB crops and hybrid crops
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Place of publication, distribution, etc. [Place of publication not identified] :
Name of publisher, distributor, etc. CGIAR,
Date of publication, distribution, etc. 2024.
300 ## - PHYSICAL DESCRIPTION
Extent 28 pages
500 ## - GENERAL NOTE
General note Open Access
520 ## - SUMMARY, ETC.
Summary, etc. Accelerated Breeding Initiative’s aim is to develop a continuous stream of climate-resilient, preferred, inclusive, high-yielding, and nutritious varieties, against the present-day global challenges such as climate change and environmental degradation. We are committed to increasing genetic gains in farmer’s fields by developing and availing to seed systems new varieties that perform well under farmer conditions and have clear advantages in essential traits that can be recognized by farmers and end-users in order to incentivise the farmers to adopt the new varieties in lieu of their familiar varieties, and to do so at a pace that matches the increasingly erratic growing conditions. The rapid cycle genomic selection (RCGS) archetype seeks to enable selection and recycling of new parents as fast as possible – preferably two-to-three-year cycles, using data that is accurately representing the target population of environments (TPE) in which the future potential varieties will grow. This will ensure that breeding populations are continuously improved to provide high-value alleles and haplotypes for adaptation to biotic and abiotic stresses, and high-value parents from which superior products are identified and released as new varieties. To achieve this we need to: i) Take advantage of the BRS-procured genotyping services with mid-density marker panels that can estimate genomic relationships and marker effects; ii) Deploy new testing strategies that sample the TPE better, using relatively similar resources, e.g. by use of sparse testing where alleles are replicated across locations in the TPE without physical replications or with partial replications, and using the family structure and genomic relationships to provide connectivity, as well as the additional use of managed stress trials to mimic different environments; iii) Build and leverage on efficient CGIAR-NARES-SME breeding networks to scale up testing sites at Early Testing 1 and develop innovative ways for resource reallocation between Early Testing and later stages of testing; iv) Recycle new parents for population improvement faster using the improved accuracy from better testing strategies. In this document we: • Articulate a value proposition for working as a breeding network to CGIAR-NARESSME partners. • Provide clear steps on how to redesign existing pipelines to optimally implement a rapid cycle genomic selection scheme, with example breeding schemes in pure line crops, roots, tubers and bananas (RTB), and hybrid crops. • We identify the support and services needed by the CGIAR-NARES-SME breeding networks to implement this archetype.
546 ## - LANGUAGE NOTE
Language note Text in English
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 10737
Topical term or geographic name as entry element Marker-assisted selection
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 1029
Topical term or geographic name as entry element Breeding
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 1069
Topical term or geographic name as entry element Crops
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 1868
Topical term or geographic name as entry element Pipes
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 1151
Topical term or geographic name as entry element Hybrids
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 5577
Topical term or geographic name as entry element Cooperation
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 1755
Topical term or geographic name as entry element Roots
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 18469
Topical term or geographic name as entry element Tubers
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 18470
Topical term or geographic name as entry element Bananas
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 26661
Personal name Werner, C.
Field link and sequence number 001712518
Relator term editor
Miscellaneous information Excellence in Breeding
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 33913
Personal name Guimaraes, L.
Relator term editor
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 8528
Personal name Quinn, M.
Field link and sequence number 001710367
Relator term editor
Miscellaneous information Research and Partnerships Program
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 967
Personal name Basnet, B.R.
Field link and sequence number INT3524
Relator term editor
Miscellaneous information Excellence in Breeding
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 863
Personal name Das, B.
Field link and sequence number INT2825
Relator term editor
Miscellaneous information Global Maize Program
-- Excellence in Breeding
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 17249
Personal name Covarrubias-Pazaran, G.
Field link and sequence number 001712000
Relator term editor
Miscellaneous information Formerly Research & Partnership Program
-- Formerly Excellence in Breeding
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 17393
Personal name Gardner, K.A.
Field link and sequence number 001712617
Relator term editor
Miscellaneous information Genetic Resources Program
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 33906
Personal name Gaynor, C.
Relator term editor
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 26662
Personal name Labroo, M.
Field link and sequence number 001712529
Relator term editor
Miscellaneous information Formerly Excellence in Breeding
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 2252
Personal name Atlin, G.N.
Relator term editor
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 33907
Personal name Lorenzenm, J.
Relator term editor
700 0# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 31134
Personal name Young Wha Lee
Field link and sequence number 001712421
Relator term editor
Miscellaneous information Formerly Excellence in Breeding
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 22817
Personal name Ehlers, J.D.
Relator term editor
856 4# - ELECTRONIC LOCATION AND ACCESS
Link text Open Access through DSpace
Uniform Resource Identifier https://hdl.handle.net/10883/23152
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Source of classification or shelving scheme Dewey Decimal Classification
Koha item type Handbook
Suppress in OPAC No
Holdings
Date last seen Total Checkouts Price effective from Koha item type Lost status Source of classification or shelving scheme Damaged status Not for loan Collection code Withdrawn status Home library Current library Date acquired
05/08/2024   05/08/2024 Handbook Not Lost Dewey Decimal Classification     CIMMYT Staff Publications Collection   CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 05/08/2024

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