Knowledge Center Catalog

Leveraging genomic resources of model species for the assessment of diversity and phylogeny in wild and domesticated lentil (Record no. 66434)

MARC details
000 -LEADER
fixed length control field 02944nab|a22003737a|4500
001 - CONTROL NUMBER
control field 66434
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20230906175907.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 20115s2011||||mx |||p|op||||00||0|eng|d
022 ## - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 0022-1503
022 ## - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 1465-7333 (Online)
024 8# - OTHER STANDARD IDENTIFIER
Standard number or code https://doi.org/10.1093/jhered/esr015
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
041 ## - LANGUAGE CODE
Language code of text/sound track or separate title eng
100 1# - MAIN ENTRY--PERSONAL NAME
Personal name Alo, F.
9 (RLIN) 31586
245 10 - TITLE STATEMENT
Title Leveraging genomic resources of model species for the assessment of diversity and phylogeny in wild and domesticated lentil
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Date of publication, distribution, etc. 2011.
Place of publication, distribution, etc. United Kingdom :
Name of publisher, distributor, etc. Oxford University Press,
500 ## - GENERAL NOTE
General note Peer review
500 ## - GENERAL NOTE
General note Free Access
520 ## - SUMMARY, ETC.
Summary, etc. Advances in comparative genomics have provided significant opportunities for analysis of genetic diversity in species with limited genomic resources, such as the genus Lens. Medicago truncatula expressed sequence tags (ESTs) were aligned with the Arabidopsis thaliana genome sequence to identify conserved exon sequences and splice sites in the ESTs. Conserved primers (CPs) based on M. truncatula EST sequences flanking one or more introns were then designed. A total of 22% of the CPs produced polymerase chain reaction amplicons in lentil and were used to sequence amplicons in 175 wild and 133 domesticated lentil accessions. Analysis of the sequences confirmed that L. nigricans and L. ervoides are well-defined species at the DNA sequence level. Lens culinaris subsp. odemensis, L. culinaris subsp. tomentosus, and L. lamottei may constitute a single taxon pending verification with crossability experiments. Lens culinaris subsp. orientalis is the progenitor of domesticated lentil, L. culinaris subsp. culinaris (as proposed before), but a more specific area of origin can be suggested in southern Turkey. We were also able to detect the divergence, following domestication, of the domesticated gene pool into overlapping large-seeded (megasperma) and small-seeded (microsperma) groups. Lentil domestication led to a loss of genetic diversity of approximately 40%. The approach followed in this research has allowed us to rapidly exploit sequence information from model plant species for the study of genetic diversity of a crop such as lentil with limited genomic resources. © 2011 The American Genetic Association. All rights reserved.
546 ## - LANGUAGE NOTE
Language note Text in English
591 ## - CATALOGING NOTES
Affiliation Furman, B.J. : Not in IRS staff list but CIMMYT Affiliation
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Domestication
Source of heading or term AGROVOC
9 (RLIN) 30583
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Lens
Source of heading or term AGROVOC
9 (RLIN) 31587
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Phylogeny
Source of heading or term AGROVOC
9 (RLIN) 9129
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Single nucleotide polymorphisms
Source of heading or term AGROVOC
9 (RLIN) 10805
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Genetic diversity (as resource)
Source of heading or term AGROVOC
9 (RLIN) 2974
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Furman, B.J.
9 (RLIN) 31588
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Akhunov, E.
9 (RLIN) 3077
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Dvorak, J.
9 (RLIN) 16465
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Gepts, P.
9 (RLIN) 9157
773 0# - HOST ITEM ENTRY
Title Journal of Heredity
Related parts v. 102, no. 3, p. 315-329
Place, publisher, and date of publication United Kingdom : Oxford University Press, 2011
International Standard Serial Number 0022-1503
Record control number G444556
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Koha item type Article
Suppress in OPAC No
Source of classification or shelving scheme Dewey Decimal Classification
Holdings
Date last seen Total Checkouts Price effective from Koha item type Lost status Source of classification or shelving scheme Damaged status Not for loan Collection code Withdrawn status Home library Current library Date acquired
09/03/2023   09/03/2023 Article Not Lost Dewey Decimal Classification     CIMMYT Staff Publications Collection   CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 09/03/2023

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