Knowledge Center Catalog

GBS-based SNP map pinpoints the QTL associated with sorghum downy mildew resistance in maize (Zea mays L.) (Record no. 65626)

MARC details
000 -LEADER
fixed length control field 03591nab|a22005417a|4500
001 - CONTROL NUMBER
control field 65626
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20230901185454.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 20228s2022||||mx |||p|op||||00||0|eng|d
022 ## - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 1664-8021 (Online)
024 8# - OTHER STANDARD IDENTIFIER
Standard number or code https://doi.org/10.3389/fgene.2022.890133
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
041 ## - LANGUAGE CODE
Language code of text/sound track or separate title eng
100 1# - MAIN ENTRY--PERSONAL NAME
Personal name Jadhav, K.P.
9 (RLIN) 28858
245 10 - TITLE STATEMENT
Title GBS-based SNP map pinpoints the QTL associated with sorghum downy mildew resistance in maize (Zea mays L.)
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Name of publisher, distributor, etc. Frontiers,
Date of publication, distribution, etc. 2022.
Place of publication, distribution, etc. Switzerland :
500 ## - GENERAL NOTE
General note Peer review
500 ## - GENERAL NOTE
General note Open Access
520 ## - SUMMARY, ETC.
Summary, etc. Sorghum downy mildew (SDM), caused by the biotrophic fungi Peronosclerospora sorghi, threatens maize production worldwide, including India. To identify quantitative trait loci (QTL) associated with resistance to SDM, we used a recombinant inbred line (RIL) population derived from a cross between resistant inbred line UMI936 (w) and susceptible inbred line UMI79. The RIL population was phenotyped for SDM resistance in three environments [E1-field (Coimbatore), E2-greenhouse (Coimbatore), and E3-field (Mandya)] and also utilized to construct the genetic linkage map by genotyping by sequencing (GBS) approach. The map comprises 1516 SNP markers in 10 linkage groups (LGs) with a total length of 6924.7 cM and an average marker distance of 4.57 cM. The QTL analysis with the phenotype and marker data detected nine QTL on chromosome 1, 2, 3, 5, 6, and 7 across three environments. Of these, QTL namely qDMR1.2, qDMR3.1, qDMR5.1, and qDMR6.1 were notable due to their high phenotypic variance. qDMR3.1 from chromosome 3 was detected in more than one environment (E1 and E2), explaining the 10.3% and 13.1% phenotypic variance. Three QTL, qDMR1.2, qDMR5.1, and qDMR6.1 from chromosomes 1, 5, and 6 were identified in either E1 or E3, explaining 15.2%–18% phenotypic variance. Moreover, genome mining on three QTL (qDMR3.1, qDMR5.1, and qDMR6.1) reveals the putative candidate genes related to SDM resistance. The information generated in this study will be helpful for map-based cloning and marker-assisted selection in maize breeding programs.
546 ## - LANGUAGE NOTE
Language note Text in English
591 ## - CATALOGING NOTES
Affiliation Gajanan Saykhedkar : Not in IRS staff list but CIMMYT Affiliation
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Genotyping
Source of heading or term AGROVOC
9 (RLIN) 22057
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Maize
Source of heading or term AGROVOC
9 (RLIN) 1173
650 #0 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Single nucleotide polymorphisms
Miscellaneous information AGROVOC
9 (RLIN) 10805
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Sorghum
Source of heading or term AGROVOC
9 (RLIN) 2002
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Downy mildews
Source of heading or term AGROVOC
9 (RLIN) 28239
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Quantitative Trait Loci
Source of heading or term AGROVOC
9 (RLIN) 1853
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Gajanan Saykhedkar
9 (RLIN) 1468
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Tamilarasi, P.M.
9 (RLIN) 28859
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Devasree, S.
9 (RLIN) 28860
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Ranjani, R.V.
9 (RLIN) 28861
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Chandran, S.
9 (RLIN) 19143
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Pukalenthy, B.
9 (RLIN) 19142
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Adhimoolam, K.
9 (RLIN) 19145
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Arulselvi, S.
9 (RLIN) 28862
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Vijayagowri, E.
9 (RLIN) 28863
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Ganesan, K.N.
9 (RLIN) 15471
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Paranidharan, V.
9 (RLIN) 28864
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Nair, S.K.
9 (RLIN) 1434
Field link and sequence number INT3232
Miscellaneous information Global Maize Program
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name BABU, R.
9 (RLIN) 875
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Ramalingam, J.
9 (RLIN) 28865
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Raveendran, M.
9 (RLIN) 3880
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Senthil, N.
9 (RLIN) 2384
773 0# - HOST ITEM ENTRY
Title Frontiers in Genetics
Related parts v. 13, art. 890133
Place, publisher, and date of publication Switzerland : Frontiers, 2022.
International Standard Serial Number 1664-8021
Record control number 58093
856 ## - ELECTRONIC LOCATION AND ACCESS
Link text Open Access through DSpace
Uniform Resource Identifier https://hdl.handle.net/10883/22204
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Koha item type Article
Suppress in OPAC No
Source of classification or shelving scheme Dewey Decimal Classification
Holdings
Date last seen Total Checkouts Price effective from Koha item type Lost status Source of classification or shelving scheme Damaged status Not for loan Collection code Withdrawn status Home library Current library Date acquired
09/27/2022   09/27/2022 Article Not Lost Dewey Decimal Classification     CIMMYT Staff Publications Collection   CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 09/27/2022

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