Knowledge Center Catalog

Genetic diversity and population structure of soybean lines adapted to Sub-Saharan Africa using single nucleotide polymorphism (SNP) markers (Record no. 64832)

MARC details
000 -LEADER
fixed length control field 02887nab|a22003737a|4500
001 - CONTROL NUMBER
control field 64832
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20230731172211.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 201118s2021||||sz |||p|op||||00||0|eng|d
022 ## - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 2073-4395 (Online)
024 8# - OTHER STANDARD IDENTIFIER
Standard number or code https://doi.org/10.3390/agronomy11030604
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
041 ## - LANGUAGE CODE
Language code of text/sound track or separate title eng
100 1# - MAIN ENTRY--PERSONAL NAME
Personal name Chander, S.
9 (RLIN) 26358
245 10 - TITLE STATEMENT
Title Genetic diversity and population structure of soybean lines adapted to Sub-Saharan Africa using single nucleotide polymorphism (SNP) markers
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Place of publication, distribution, etc. Basel (Switzerland) :
Name of publisher, distributor, etc. MDPI,
Date of publication, distribution, etc. 2021.
500 ## - GENERAL NOTE
General note Peer review
500 ## - GENERAL NOTE
General note Open Access
520 ## - SUMMARY, ETC.
Summary, etc. Soybean productivity in sub-Saharan Africa (SSA) is less than half of the global average yield. To plug the productivity gap, further improvement in grain yield must be attained by enhancing the genetic potential of new cultivars that depends on the genetic diversity of the parents. Hence, our aim was to assess genetic diversity and population structure of elite soybean genotypes, mainly released cultivars and advanced selections in SSA. In this study, a set of 165 lines was genotyped with high-throughput single nucleotide polymorphism (SNP) markers covering the complete genome of soybean. The genetic diversity (0.414) was high considering the bi-allelic nature of SNP markers. The polymorphic information content (PIC) varied from 0.079 to 0.375, with an average of 0.324 and about 49% of the markers had a PIC value above 0.350. Cluster analysis grouped all the genotypes into three major clusters. The model-based STRUCTURE and discriminant analysis of principal components (DAPC) exhibited high consistency in the allocation of lines in subpopulations or groups. Nonetheless, they presented some discrepancy and identified the presence of six and five subpopulations or groups, respectively. Principal coordinate analysis revealed more consistency with subgroups suggested by DAPC analysis. Our results clearly revealed the broad genetic base of TGx (Tropical Glycine max) lines that soybean breeders may select parents for crossing, testing and selection of future cultivars with desirable traits for SSA.
546 ## - LANGUAGE NOTE
Language note Text in English
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Genetic diversity
Source of heading or term AGROVOC
9 (RLIN) 1125
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Population Structure
Source of heading or term AGROVOC
9 (RLIN) 8720
650 #0 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Single nucleotide polymorphisms
Miscellaneous information AGROVOC
9 (RLIN) 10805
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Soybeans
Source of heading or term AGROVOC
9 (RLIN) 3639
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Garcia Oliveira, A.L.
9 (RLIN) 6873
Miscellaneous information Research & Partnership Program
-- Excellence in Breeding
Field link and sequence number 001712333
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Gedil, M.
9 (RLIN) 4750
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Shah, T.
9 (RLIN) 17711
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Otusanya, G.O.
9 (RLIN) 26359
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Asiedu, R.
9 (RLIN) 10233
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Chigeza, G.
9 (RLIN) 26360
773 0# - HOST ITEM ENTRY
Related parts v. 11, no. 3, art. 604
Place, publisher, and date of publication Basel (Switzerland) : MDPI, 2021.
Title Agronomy
International Standard Serial Number 2073-4395
856 4# - ELECTRONIC LOCATION AND ACCESS
Link text Open Access through DSpace
Uniform Resource Identifier https://hdl.handle.net/10883/21806
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Koha item type Article
Suppress in OPAC No
Source of classification or shelving scheme Dewey Decimal Classification
Holdings
Date last seen Total Checkouts Price effective from Koha item type Lost status Source of classification or shelving scheme Damaged status Not for loan Collection code Withdrawn status Home library Current library Date acquired
01/07/2022   01/07/2022 Article Not Lost Dewey Decimal Classification     CIMMYT Staff Publications Collection   CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 01/07/2022

International Maize and Wheat Improvement Center (CIMMYT) © Copyright 2021.
Carretera México-Veracruz. Km. 45, El Batán, Texcoco, México, C.P. 56237.
If you have any question, please contact us at
CIMMYT-Knowledge-Center@cgiar.org