Knowledge Center Catalog

Genomic regions associated with heat stress tolerance in tropical maize (Zea mays L.) (Record no. 64823)

MARC details
000 -LEADER
fixed length control field 03619nab|a22005057a|4500
001 - CONTROL NUMBER
control field 64823
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20231011234127.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 202102s2021||||xxk|||p|op||||00||0|eng|d
022 ## - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 2045-2322 (Online)
024 8# - OTHER STANDARD IDENTIFIER
Standard number or code https://doi.org/10.1038/s41598-021-93061-7
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
041 ## - LANGUAGE CODE
Language code of text/sound track or separate title eng
100 1# - MAIN ENTRY--PERSONAL NAME
Personal name Seetharam, K.
9 (RLIN) 1446
245 10 - TITLE STATEMENT
Title Genomic regions associated with heat stress tolerance in tropical maize (Zea mays L.)
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Place of publication, distribution, etc. London (United Kingdom) :
Name of publisher, distributor, etc. Nature Publishing Group,
Date of publication, distribution, etc. 2021.
500 ## - GENERAL NOTE
General note Peer review
500 ## - GENERAL NOTE
General note Open Access
520 ## - SUMMARY, ETC.
Summary, etc. With progressive climate change and the associated increase in mean temperature, heat stress tolerance has emerged as one of the key traits in the product profile of the maize breeding pipeline for lowland tropics. The present study aims to identify the genomic regions associated with heat stress tolerance in tropical maize. An association mapping panel, called the heat tolerant association mapping (HTAM) panel, was constituted by involving a total of 543 tropical maize inbred lines from diverse genetic backgrounds, test-crossed and phenotyped across nine locations in South Asia under natural heat stress. The panel was genotyped using a genotyping-by-sequencing (GBS) platform. Considering the large variations in vapor pressure deficit (VPD) at high temperature (Tmax) across different phenotyping locations, genome-wide association study (GWAS) was conducted separately for each location. The individual location GWAS identified a total of 269 novel significant single nucleotide polymorphisms (SNPs) for grain yield under heat stress at a p value ofโ€‰<โ€‰10โ€“5. A total of 175 SNPs were found in 140 unique gene models implicated in various biological pathway responses to different abiotic stresses. Haplotype trend regression (HTR) analysis of the significant SNPs identified 26 haplotype blocks and 96 single SNP variants significant across one to five locations. The genomic regions identified based on GWAS and HTR analysis considering genomic region x environment interactions are useful for breeding efforts aimed at developing heat stress resilient maize cultivars for current and future climatic conditions through marker-assisted introgression into elite genetic backgrounds and/or genome-wide selection.
526 ## - STUDY PROGRAM INFORMATION NOTE
Program name Maize CRP
Maize Flagship Projects FP3 - Stress resilient and nutritious maize
546 ## - LANGUAGE NOTE
Language note Text in English
591 ## - CATALOGING NOTES
Affiliation Seetharam, K. : Not in IRS Staff list but CIMMYT Affiliation
591 ## - CATALOGING NOTES
Affiliation Sudarsanam, V. : Not in IRS Staff list but CIMMYT Affiliation
591 ## - CATALOGING NOTES
Affiliation Das, R.R. : Not in IRS Staff list but CIMMYT Affiliation
591 ## - CATALOGING NOTES
Affiliation Vemuri, H. : Not in IRS Staff list but CIMMYT Affiliation
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Genomics
Source of heading or term AGROVOC
9 (RLIN) 1132
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Heat tolerance
Source of heading or term AGROVOC
9 (RLIN) 1972
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Maize
Source of heading or term AGROVOC
9 (RLIN) 1173
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Kuchanur, P.H.
9 (RLIN) 3769
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Koirala, K.B.
9 (RLIN) 2054
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Tripathi, M.P.
9 (RLIN) 18052
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Patil, A.
9 (RLIN) 3768
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Sudarsanam, V.
9 (RLIN) 26341
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Das, R.R.
9 (RLIN) 17505
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Chaurasia, R.
9 (RLIN) 18055
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Pandey, K.
9 (RLIN) 18054
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Vemuri, H.
9 (RLIN) 26342
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Vinayan, M.T.
9 (RLIN) 925
Field link and sequence number INT3341
Miscellaneous information Global Maize Program
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Nair, S.K.
9 (RLIN) 1434
Field link and sequence number INT3232
Miscellaneous information Global Maize Program
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name BABU, R.
9 (RLIN) 875
Field link and sequence number INT2925
Miscellaneous information Global Maize Program
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Zaidi, P.H.
9 (RLIN) 862
Field link and sequence number INT2823
Miscellaneous information Global Maize Program
773 0# - HOST ITEM ENTRY
Related parts v. 11, art. 13730
Place, publisher, and date of publication London : Nature Publishing Group, 2021.
International Standard Serial Number 2045-2322
Title Nature Scientific Reports
Record control number a58025
856 4# - ELECTRONIC LOCATION AND ACCESS
Link text Open Access through DSpace
Uniform Resource Identifier https://hdl.handle.net/10883/21798
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Koha item type Article
Suppress in OPAC No
Source of classification or shelving scheme Dewey Decimal Classification
Holdings
Date last seen Total Checkouts Price effective from Koha item type Lost status Source of classification or shelving scheme Damaged status Not for loan Collection code Withdrawn status Home library Current library Date acquired
01/07/2022   01/07/2022 Article Not Lost Dewey Decimal Classification     CIMMYT Staff Publications Collection   CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 01/07/2022

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