Knowledge Center Catalog

Distributed flux balance analysis simulations of serial biomass fermentation by two organisms (Record no. 64714)

MARC details
000 -LEADER
fixed length control field 02856nab|a22003977a|4500
001 - CONTROL NUMBER
control field 64714
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20211217225832.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 211206s2020 xxu||||| |||| 00| 0 eng d
022 ## - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 1932-6203 (Online)
024 8# - OTHER STANDARD IDENTIFIER
Standard number or code https://doi.org/10.1371/journal.pone.0227363
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
041 ## - LANGUAGE CODE
Language code of text/sound track or separate title eng
100 1# - MAIN ENTRY--PERSONAL NAME
Personal name Vitkin, E.
9 (RLIN) 25975
245 10 - TITLE STATEMENT
Title Distributed flux balance analysis simulations of serial biomass fermentation by two organisms
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Place of publication, distribution, etc. San Francisco, CA (USA) :
Name of publisher, distributor, etc. Public Library of Science
Date of publication, distribution, etc. 2020.
500 ## - GENERAL NOTE
General note Peer review
500 ## - GENERAL NOTE
General note Open Access
520 ## - SUMMARY, ETC.
Summary, etc. Intelligent biorefinery design that addresses both the composition of the biomass feedstock as well as fermentation microorganisms could benefit from dedicated tools for computational simulation and computer-assisted optimization. Here we present the BioLego Vn2.0 framework, based on Microsoft Azure Cloud, which supports large-scale simulations of biomass serial fermentation processes by two different organisms. BioLego enables the simultaneous analysis of multiple fermentation scenarios and the comparison of fermentation potential of multiple feedstock compositions. Thanks to the effective use of cloud computing it further allows resource intensive analysis and exploration of media and organism modifications. We use BioLego to obtain biological and validation results, including (1) exploratory search for the optimal utilization of corn biomasses—corn cobs, corn fiber and corn stover—in fermentation biorefineries; (2) analysis of the possible effects of changes in the composition of K. alvarezi biomass on the ethanol production yield in an anaerobic two-step process (S. cerevisiae followed by E. coli); (3) analysis of the impact, on the estimated ethanol production yield, of knocking out single organism reactions either in one or in both organisms in an anaerobic two-step fermentation process of Ulva sp. into ethanol (S. cerevisiae followed by E. coli); and (4) comparison of several experimentally measured ethanol fermentation rates with the predictions of BioLego.
546 ## - LANGUAGE NOTE
Language note Text in English
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Fermentation
Source of heading or term AGROVOC
9 (RLIN) 12531
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Ethanol
Source of heading or term AGROVOC
9 (RLIN) 14591
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Saccharomyces cerevisiae
Source of heading or term AGROVOC
9 (RLIN) 25976
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Maize
Source of heading or term AGROVOC
9 (RLIN) 1173
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Glucose
Source of heading or term AGROVOC
9 (RLIN) 22525
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Bioenergy
Source of heading or term AGROVOC
9 (RLIN) 2587
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Oxygen
Source of heading or term AGROVOC
9 (RLIN) 12478
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Gillis, A.
9 (RLIN) 25977
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Polikovsky, M.
9 (RLIN) 25978
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Bender, B.
9 (RLIN) 25979
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Golberg, A.
9 (RLIN) 25980
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Yakhini, Z.
9 (RLIN) 25981
773 0# - HOST ITEM ENTRY
Title PLoS ONE
Related parts v. 15, no. 1, e0227363
Place, publisher, and date of publication San Francisco, CA (USA) : Public Library of Science, 2020.
International Standard Serial Number 1932-6203
Record control number G94957
856 4# - ELECTRONIC LOCATION AND ACCESS
Link text Click here to access online
Uniform Resource Identifier https://doi.org/10.1371/journal.pone.0227363
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Koha item type Article
Suppress in OPAC No
Source of classification or shelving scheme Dewey Decimal Classification
Holdings
Date last seen Total Checkouts Price effective from Koha item type Lost status Source of classification or shelving scheme Damaged status Not for loan Collection code Withdrawn status Home library Current library Date acquired
12/13/2021   12/13/2021 Article Not Lost Dewey Decimal Classification     Reprints Collection   CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 12/13/2021

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