MARC details
| 000 -LEADER |
|---|
| fixed length control field |
03695nab|a22004097a|4500 |
| 001 - CONTROL NUMBER |
|---|
| control field |
64428 |
| 003 - CONTROL NUMBER IDENTIFIER |
|---|
| control field |
MX-TxCIM |
| 005 - DATE AND TIME OF LATEST TRANSACTION |
|---|
| control field |
20230711184811.0 |
| 008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION |
|---|
| fixed length control field |
202109s2021||||sz |||p|op||||00||0|eng|d |
| 022 ## - INTERNATIONAL STANDARD SERIAL NUMBER |
|---|
| International Standard Serial Number |
1664-8021 (Online) |
| 024 8# - OTHER STANDARD IDENTIFIER |
|---|
| Standard number or code |
https://doi.org/10.3389/fgene.2021.710485 |
| 040 ## - CATALOGING SOURCE |
|---|
| Original cataloging agency |
MX-TxCIM |
| 041 ## - LANGUAGE CODE |
|---|
| Language code of text/sound track or separate title |
eng |
| 100 1# - MAIN ENTRY--PERSONAL NAME |
|---|
| Personal name |
Tomar, V. |
| 9 (RLIN) |
11316 |
| 245 10 - TITLE STATEMENT |
|---|
| Title |
Evaluations of genomic prediction and identification of new loci for resistance to stripe rust disease in wheat (Triticum aestivum L.) |
| 260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT) |
|---|
| Place of publication, distribution, etc. |
Switzerland : |
| Name of publisher, distributor, etc. |
Frontiers, |
| Date of publication, distribution, etc. |
2021. |
| 500 ## - GENERAL NOTE |
|---|
| General note |
Peer review |
| 500 ## - GENERAL NOTE |
|---|
| General note |
Open Access |
| 520 ## - SUMMARY, ETC. |
|---|
| Summary, etc. |
Stripe rust is one of the most destructive diseases of wheat (Triticum aestivum L.), caused by Puccinia striiformis f. sp. tritici (Pst), and responsible for significant yield losses worldwide. Single-nucleotide polymorphism (SNP) diagnostic markers were used to identify new sources of resistance at adult plant stage to wheat stripe rust (YR) in 141 CIMMYT advanced bread wheat lines over 3 years in replicated trials at Borlaug Institute for South Asia (BISA), Ludhiana. We performed a genome-wide association study and genomic prediction to aid the genetic gain by accumulating disease resistance alleles. The responses to YR in 141 advanced wheat breeding lines at adult plant stage were used to generate G × E (genotype × environment)-dependent rust scores for prediction and genome-wide association study (GWAS), eliminating variation due to climate and disease pressure changes. The lowest mean prediction accuracies were 0.59 for genomic best linear unbiased prediction (GBLUP) and ridge-regression BLUP (RRBLUP), while the highest mean was 0.63 for extended GBLUP (EGBLUP) and random forest (RF), using 14,563 SNPs and the G × E rust score results. RF and EGBLUP predicted higher accuracies (∼3%) than did GBLUP and RRBLUP. Promising genomic prediction demonstrates the viability and efficacy of improving quantitative rust tolerance. The resistance to YR in these lines was attributed to eight quantitative trait loci (QTLs) using the FarmCPU algorithm. Four (Q.Yr.bisa-2A.1, Q.Yr.bisa-2D, Q.Yr.bisa-5B.2, and Q.Yr.bisa-7A) of eight QTLs linked to the diagnostic markers were mapped at unique loci (previously unidentified for Pst resistance) and possibly new loci. The statistical evidence of effectiveness and distribution of the new diagnostic markers for the resistance loci would help to develop new stripe rust resistance sources. These diagnostic markers along with previously established markers would be used to create novel DNA biosensor-based microarrays for rapid detection of the resistance loci on large panels upon functional validation of the candidate genes identified in the present study to aid in rapid genetic gain in the future breeding programs. |
| 546 ## - LANGUAGE NOTE |
|---|
| Language note |
Text in English |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| Topical term or geographic name as entry element |
Marker-assisted selection |
| Source of heading or term |
AGROVOC |
| 9 (RLIN) |
10737 |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| Topical term or geographic name as entry element |
Quantitative Trait Loci |
| Source of heading or term |
AGROVOC |
| 9 (RLIN) |
1853 |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| Topical term or geographic name as entry element |
Rusts |
| 9 (RLIN) |
1251 |
| Source of heading or term |
AGROVOC |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| Topical term or geographic name as entry element |
Genotyping |
| Source of heading or term |
AGROVOC |
| 9 (RLIN) |
22057 |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| Topical term or geographic name as entry element |
Triticum aestivum |
| Source of heading or term |
AGROVOC |
| 9 (RLIN) |
1296 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Dhillon, G.S. |
| 9 (RLIN) |
18242 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Singh, D. |
| 9 (RLIN) |
3851 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Singh, R.P. |
| Miscellaneous information |
Global Wheat Program |
| 9 (RLIN) |
825 |
| Field link and sequence number |
INT0610 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Poland, J.A. |
| 9 (RLIN) |
2092 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Chaudhary, A.A. |
| 9 (RLIN) |
24332 |
| 700 0# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Bhati, P.K. |
| 9 (RLIN) |
7677 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Joshi, A.K. |
| Miscellaneous information |
Global Wheat Program |
| 9 (RLIN) |
873 |
| Field link and sequence number |
INT2917 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Kumar, U. |
| Miscellaneous information |
Formerly Borlaug Institute for South Asia (BISA) |
| Field link and sequence number |
INT3331 |
| 9 (RLIN) |
921 |
| 773 0# - HOST ITEM ENTRY |
|---|
| Title |
Frontiers in Genetics |
| Related parts |
v. 12, art. 710485 |
| Place, publisher, and date of publication |
Switzerland : Frontiers, 2021. |
| International Standard Serial Number |
1664-8021 |
| Record control number |
58093 |
| 856 4# - ELECTRONIC LOCATION AND ACCESS |
|---|
| Link text |
Open Access through DSpace |
| Uniform Resource Identifier |
https://hdl.handle.net/10883/21707 |
| 942 ## - ADDED ENTRY ELEMENTS (KOHA) |
|---|
| Koha item type |
Article |
| Suppress in OPAC |
No |
| Source of classification or shelving scheme |
Dewey Decimal Classification |