Knowledge Center Catalog

Genomic prediction with genotype by environment interaction analysis for kernel zinc concentration in tropical maize germplasm (Record no. 62979)

MARC details
000 -LEADER
fixed length control field 03136nab|a22004337a|4500
001 - CONTROL NUMBER
control field 62979
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20240919020952.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 200910s2020||||xxu|||p|op||||00||0|eng|d
022 ## - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 2160-1836 (Online)
024 8# - OTHER STANDARD IDENTIFIER
Standard number or code https://doi.org/10.1534/g3.120.401172
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
041 ## - LANGUAGE CODE
Language code of text/sound track or separate title eng
100 1# - MAIN ENTRY--PERSONAL NAME
Personal name Mageto, E.K.
9 (RLIN) 5413
245 10 - TITLE STATEMENT
Title Genomic prediction with genotype by environment interaction analysis for kernel zinc concentration in tropical maize germplasm
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Place of publication, distribution, etc. Bethesda, MD (USA) :
Name of publisher, distributor, etc. Genetics Society of America,
Date of publication, distribution, etc. 2020.
500 ## - GENERAL NOTE
General note Peer review
500 ## - GENERAL NOTE
General note Open Access
520 ## - SUMMARY, ETC.
Summary, etc. Zinc (Zn) deficiency is a major risk factor for human health, affecting about 30% of the world’s population. To study the potential of genomic selection (GS) for maize with increased Zn concentration, an association panel and two doubled haploid (DH) populations were evaluated in three environments. Three genomic prediction models, M (M1: Environment + Line, M2: Environment + Line + Genomic, and M3: Environment + Line + Genomic + Genomic x Environment) incorporating main effects (lines and genomic) and the interaction between genomic and environment (G x E) were assessed to estimate the prediction ability (rMP) for each model. Two distinct cross-validation (CV) schemes simulating two genomic prediction breeding scenarios were used. CV1 predicts the performance of newly developed lines, whereas CV2 predicts the performance of lines tested in sparse multi-location trials. Predictions for Zn in CV1 ranged from -0.01 to 0.56 for DH1, 0.04 to 0.50 for DH2 and -0.001 to 0.47 for the association panel. For CV2, rMP values ranged from 0.67 to 0.71 for DH1, 0.40 to 0.56 for DH2 and 0.64 to 0.72 for the association panel. The genomic prediction model which included G x E had the highest average rMP for both CV1 (0.39 and 0.44) and CV2 (0.71 and 0.51) for the association panel and DH2 population, respectively. These results suggest that GS has potential to accelerate breeding for enhanced kernel Zn concentration by facilitating selection of superior genotypes.
526 ## - STUDY PROGRAM INFORMATION NOTE
Program name Maize CRP
Wheat Flagship Projects FP2 - Novel diversity and tools adapt to climate change and resource constraints
546 ## - LANGUAGE NOTE
Language note Text in English
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 1314
Topical term or geographic name as entry element Zea mays
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 1130
Topical term or geographic name as entry element Genetics
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Breeding
Miscellaneous information AGROVOC
Source of heading or term
9 (RLIN) 1029
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 1315
Topical term or geographic name as entry element Zinc
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 1133
Topical term or geographic name as entry element Genotype environment interaction
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Crossa, J.
Miscellaneous information Genetic Resources Program
Field link and sequence number CCJL01
9 (RLIN) 59
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 2703
Personal name Perez-Rodriguez, P.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 935
Personal name Dhliwayo, T.
Field link and sequence number INT3355
Miscellaneous information Global Maize Program
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 850
Personal name Palacios-Rojas, N.
Field link and sequence number INT2691
Miscellaneous information Global Maize Program
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 5361
Personal name Lee, M.
700 0# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 11572
Personal name Rui Guo
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 884
Personal name San Vicente, F.M.
Field link and sequence number INT3035
Miscellaneous information Global Maize Program
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name Xuecai Zhang
Miscellaneous information Global Maize Program
Field link and sequence number INT3400
9 (RLIN) 951
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 6100
Personal name Hindu, V.
773 0# - HOST ITEM ENTRY
Title G3: Genes, Genomes, Genetics
Related parts v. 10, no. 8, p. 2629-2639
Place, publisher, and date of publication Bethesda, MD (USA) : Genetics Society of America, 2020.
International Standard Serial Number 2160-1836
Record control number u56922
856 4# - ELECTRONIC LOCATION AND ACCESS
Link text Open Access through DSpace
Uniform Resource Identifier https://hdl.handle.net/10883/21065
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Koha item type Article
Suppress in OPAC No
Source of classification or shelving scheme Dewey Decimal Classification
Holdings
Date last seen Total Checkouts Price effective from Koha item type Lost status Source of classification or shelving scheme Damaged status Not for loan Collection code Withdrawn status Home library Current library Date acquired
12/08/2020   12/08/2020 Article Not Lost Dewey Decimal Classification     CIMMYT Staff Publications Collection   CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 12/08/2020

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