Knowledge Center Catalog

Genomic-enabled prediction in maize using kernel models with genotype x environment interaction (Record no. 59300)

MARC details
000 -LEADER
fixed length control field 03077nab a22003857a 4500
001 - CONTROL NUMBER
control field 59300
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20240919020949.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 180226s2017 mdu|||p|op||| 00| 0 eng d
024 8# - OTHER STANDARD IDENTIFIER
Standard number or code https://doi.org/10.1534/g3.117.042341
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
041 ## - LANGUAGE CODE
Language code of text/sound track or separate title eng
100 1# - MAIN ENTRY--PERSONAL NAME
9 (RLIN) 6505
Personal name Bandeira e Sousa, M.
245 10 - TITLE STATEMENT
Title Genomic-enabled prediction in maize using kernel models with genotype x environment interaction
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Place of publication, distribution, etc. Bethesda, Maryland, U.S. :
Name of publisher, distributor, etc. Genetics Society of America,
Date of publication, distribution, etc. 2017.
500 ## - GENERAL NOTE
General note Peer review
500 ## - GENERAL NOTE
General note Open Access
520 ## - SUMMARY, ETC.
Summary, etc. Multi-environment trials are routinely conducted in plant breeding to select candidates for the next selection cycle. In this study, we compare the prediction accuracy of four developed genomic-enabled prediction models: (1) single-environment, main genotypic effect model (SM); (2) multi-environment, main genotypic effects model (MM); (3) multi-environment, single variance G×E deviation model (MDs); and (4) multi-environment, environment-specific variance G×E deviation model (MDe). Each of these four models were fitted using two kernel methods: a linear kernel Genomic Best Linear Unbiased Predictor, GBLUP (GB), and a nonlinear kernel Gaussian kernel (GK). The eight model-method combinations were applied to two extensive Brazilian maize data sets (HEL and USP data sets), having different numbers of maize hybrids evaluated in different environments for grain yield (GY), plant height (PH), and ear height (EH). Results show that the MDe and the MDs models fitted with the Gaussian kernel (MDe-GK, and MDs-GK) had the highest prediction accuracy. For GY in the HEL data set, the increase in prediction accuracy of SM-GK over SM-GB ranged from 9 to 32%. For the MM, MDs, and MDe models, the increase in prediction accuracy of GK over GB ranged from 9 to 49%. For GY in the USP data set, the increase in prediction accuracy of SM-GK over SM-GB ranged from 0 to 7%. For the MM, MDs, and MDe models, the increase in prediction accuracy of GK over GB ranged from 34 to 70%. For traits PH and EH, gains in prediction accuracy of models with GK compared to models with GB were smaller than those achieved in GY. Also, these gains in prediction accuracy decreased when a more difficult prediction problem was studied.
526 ## - STUDY PROGRAM INFORMATION NOTE
Program name Maize CRP
Maize Flagship Projects FP2 - Novel tools, technologies and traits for improving genetic gains and breeding efficiency
546 ## - LANGUAGE NOTE
Language note Text in English
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
9 (RLIN) 2701
Topical term or geographic name as entry element Forecasting
Source of heading or term AGROVOC
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
9 (RLIN) 1132
Topical term or geographic name as entry element Genomics
Source of heading or term AGROVOC
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Maize
Miscellaneous information AGROVOC
Source of heading or term
9 (RLIN) 1173
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
9 (RLIN) 1133
Topical term or geographic name as entry element Genotype environment interaction
Source of heading or term AGROVOC
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 4437
Personal name Cuevas, J.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 6506
Personal name De Oliveira Couto, E.G.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 2703
Personal name Perez-Rodriguez, P.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 1934
Personal name Jarquín, D.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 6507
Personal name Fritsche-Neto, R.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 907
Personal name Burgueño, J.
Miscellaneous information Genetic Resources Program
Field link and sequence number INT3239
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Crossa, J.
Miscellaneous information Genetic Resources Program
Field link and sequence number CCJL01
9 (RLIN) 59
773 0# - HOST ITEM ENTRY
Related parts v. 7, no, 6, p. 1995-2014
Title G3: Genes, Genomes, Genetics
Record control number u56922
International Standard Serial Number 2160-1836
856 4# - ELECTRONIC LOCATION AND ACCESS
Link text Open Access through DSpace
Uniform Resource Identifier https://hdl.handle.net/10883/19328
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Source of classification or shelving scheme Dewey Decimal Classification
Koha item type Article
Suppress in OPAC No
Holdings
Date last seen Total Checkouts Price effective from Koha item type Lost status Source of classification or shelving scheme Damaged status Not for loan Collection code Withdrawn status Home library Current library Date acquired
02/26/2018   02/26/2018 Article Not Lost Dewey Decimal Classification     CIMMYT Staff Publications Collection   CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 02/26/2018

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