Knowledge Center Catalog

Genomic prediction with pedigree and genotype X environment interaction in Spring Wheat grown in South and West Asia, North Africa, and Mexico. (Record no. 58547)

MARC details
000 -LEADER
fixed length control field 02963nab a22003617a 4500
001 - CONTROL NUMBER
control field 58547
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20240919020949.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 150722s2017 xxu|||p|op||| 00| 0 eng d
024 8# - OTHER STANDARD IDENTIFIER
Standard number or code https://doi.org/10.1534/g3.116.036251
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
100 1# - MAIN ENTRY--PERSONAL NAME
Personal name Sukumaran, S.
Miscellaneous information Formerly Global Wheat Program
Field link and sequence number INT3330
9 (RLIN) 920
245 10 - TITLE STATEMENT
Title Genomic prediction with pedigree and genotype X environment interaction in Spring Wheat grown in South and West Asia, North Africa, and Mexico.
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Place of publication, distribution, etc. Bethesda, MD :
Name of publisher, distributor, etc. Genetics Society of America,
Date of publication, distribution, etc. 2017.
500 ## - GENERAL NOTE
General note Open Access
500 ## - GENERAL NOTE
General note Peer review
520 ## - SUMMARY, ETC.
Summary, etc. Developing genomic selection (GS) models is an important step in applying GS to accelerate the rate of genetic gain in grain yield in plant breeding. In this study, seven genomic prediction models under two cross-validation (CV) scenarios were tested on 287 advanced elite spring wheat lines phenotyped for grain yield (GY), thousand-grain weight (GW), grain number (GN), and thermal time for flowering (TTF) in 18 international environments (year-location combinations) in major wheat-producing countries in 2010 and 2011. Prediction models with genomic and pedigree information included main effects and interaction with environments. Two random CV schemes were applied to predict a subset of lines that were not observed in any of the 18 environments (CV1), and a subset of lines that were not observed in a set of the environments, but were observed in other environments (CV2). Genomic prediction models, including genotype × environment (G×E) interaction, had the highest average prediction ability under the CV1 scenario for GY (0.31), GN (0.32), GW (0.45), and TTF (0.27). For CV2, the average prediction ability of the model including the interaction terms was generally high for GY (0.38), GN (0.43), GW (0.63), and TTF (0.53). Wheat lines in site-year combinations in Mexico and India had relatively high prediction ability for GY and GW. Results indicated that prediction ability of lines not observed in certain environments could be relatively high for genomic selection when predicting G×E interaction in multi-environment trials.
526 ## - STUDY PROGRAM INFORMATION NOTE
Program name Wheat CRP
Wheat Flagship Projects FP2 - Novel diversity and tools adapt to climate change and resource constraints
546 ## - LANGUAGE NOTE
Language note Text in English
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
9 (RLIN) 1132
Topical term or geographic name as entry element Genomics
Source of heading or term AGROVOC
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
9 (RLIN) 4674
Topical term or geographic name as entry element Pedigree livestock
Source of heading or term AGROVOC
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
9 (RLIN) 1806
Topical term or geographic name as entry element Spring wheat
Source of heading or term AGROVOC
651 #7 - SUBJECT ADDED ENTRY--GEOGRAPHIC NAME
9 (RLIN) 4026
Geographic name Asia
Source of heading or term AGROVOC
651 #7 - SUBJECT ADDED ENTRY--GEOGRAPHIC NAME
9 (RLIN) 4695
Geographic name North Africa
Source of heading or term AGROVOC
651 #7 - SUBJECT ADDED ENTRY--GEOGRAPHIC NAME
9 (RLIN) 1318
Geographic name Mexico
Source of heading or term AGROVOC
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Crossa, J.
Miscellaneous information Genetic Resources Program
Field link and sequence number CCJL01
9 (RLIN) 59
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 1934
Personal name Jarquín, D.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 865
Personal name Lopes, M.S.
Miscellaneous information Global Wheat Program
Field link and sequence number INT2835
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Reynolds, M.P.
Miscellaneous information Global Wheat Program
Field link and sequence number INT1511
9 (RLIN) 831
773 0# - HOST ITEM ENTRY
Record control number u56922
International Standard Serial Number 2160-1836
Place, publisher, and date of publication Bethesda, MD : Genetics Society of America,
Title G3: Genes, Genomes, Genetics
Related parts v. 7, no. 2, p. 481-495
856 4# - ELECTRONIC LOCATION AND ACCESS
Link text Open Access through DSpace
Uniform Resource Identifier https://hdl.handle.net/10883/18607
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Source of classification or shelving scheme Dewey Decimal Classification
Koha item type Article
Suppress in OPAC No
Holdings
Date last seen Total Checkouts Price effective from Koha item type Lost status Source of classification or shelving scheme Damaged status Not for loan Collection code Withdrawn status Home library Current library Date acquired
04/28/2017   04/28/2017 Article Not Lost Dewey Decimal Classification     CIMMYT Staff Publications Collection   CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 04/28/2017

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