Knowledge Center Catalog

Genomic and pedigree-based prediction for leaf, stem, and striperust resistance in wheat (Record no. 58540)

MARC details
000 -LEADER
fixed length control field 03668nab a22004457a 4500
001 - CONTROL NUMBER
control field 58540
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20240919021225.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 151021b2017 gw |||p|op||| 00| 0 eng d
024 8# - OTHER STANDARD IDENTIFIER
Standard number or code https://doi.org/10.1007/s00122-017-2897-1
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
041 ## - LANGUAGE CODE
Language code of text/sound track or separate title eng
100 1# - MAIN ENTRY--PERSONAL NAME
Personal name JULIANA P.
Field link and sequence number 001710082
Miscellaneous information Formerly ​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​​Global Wheat Program
-- Formerly BISA
9 (RLIN) 2690
245 10 - TITLE STATEMENT
Title Genomic and pedigree-based prediction for leaf, stem, and striperust resistance in wheat
Medium [Electronic Resource]
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Place of publication, distribution, etc. Berlin, Germany :
Name of publisher, distributor, etc. Springer-Verlag Heidelberg,
Date of publication, distribution, etc. 2017.
500 ## - GENERAL NOTE
General note Peer review
500 ## - GENERAL NOTE
General note Open Access
520 ## - SUMMARY, ETC.
Summary, etc. The unceasing plant-pathogen arms race and ephemeral nature of some rust resistance genes have been challenging for wheat (Triticum aestivum L.) breeding programs and farmers. Hence, it is important to devise strategies for effective evaluation and exploitation of quantitative rust resistance. One promising approach that could accelerate gain from selection for rust resistance is ‘genomic selection’ which utilizes dense genome-wide markers to estimate the breeding values (BVs) for quantitative traits. Our objective was to compare three genomic prediction models including genomic best linear unbiased prediction (GBLUP), GBLUP A that was GBLUP with selected loci as fixed effects and reproducing kernel Hilbert spaces-markers (RKHS-M) with least-squares (LS) approach, RKHS-pedigree (RKHS-P), and RKHS markers and pedigree (RKHS-MP) to determine the BVs for seedling and/or adult plant resistance (APR) to leaf rust (LR), stem rust (SR), and stripe rust (YR). The 333 lines in the 45th IBWSN and the 313 lines in the 46th IBWSN were genotyped using genotyping-by-sequencing and phenotyped in replicated trials. The mean prediction accuracies ranged from 0.31–0.74 for LR seedling, 0.12–0.56 for LR APR, 0.31–0.65 for SR APR, 0.70–0.78 for YR seedling, and 0.34–0.71 for YR APR. For most datasets, the RKHS-MP model gave the highest accuracies, while LS gave the lowest. GBLUP, GBLUP A, RKHS-M, and RKHS-P models gave similar accuracies. Using genome-wide marker-based models resulted in an average of 42% increase in accuracy over LS. We conclude that GS is a promising approach for improvement of quantitative rust resistance and can be implemented in the breeding pipeline.
526 ## - STUDY PROGRAM INFORMATION NOTE
Program name Wheat CRP
Wheat Flagship Projects FP3 - Global partnership to accelerate genetic gain in farmers field
546 ## - LANGUAGE NOTE
Language note Text in English
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
9 (RLIN) 1132
Topical term or geographic name as entry element Genomics
Source of heading or term AGROVOC
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Wheat
Miscellaneous information AGROVOC
Source of heading or term
9 (RLIN) 1310
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Rusts
Miscellaneous information AGROVOC
Source of heading or term
9 (RLIN) 1251
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Disease resistance
Miscellaneous information AGROVOC
Source of heading or term
9 (RLIN) 1077
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Plant breeding
Miscellaneous information AGROVOC
Source of heading or term
9 (RLIN) 1203
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
9 (RLIN) 2091
Topical term or geographic name as entry element Genetic gain
Source of heading or term AGROVOC
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Singh, R.P.
Miscellaneous information Global Wheat Program
Field link and sequence number INT0610
9 (RLIN) 825
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Pawan Kumar Singh
Miscellaneous information Global Wheat Program
Field link and sequence number INT2868
9 (RLIN) 868
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Crossa, J.
Miscellaneous information Genetic Resources Program
Field link and sequence number CCJL01
9 (RLIN) 59
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Huerta-Espino, J.
Miscellaneous information Global Wheat Program
Field link and sequence number CHUE01
9 (RLIN) 397
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 901
Personal name Caixia Lan
Field link and sequence number INT3206
Miscellaneous information Global Wheat Program
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 867
Personal name Bhavani, S.
Miscellaneous information Global Wheat Program
Field link and sequence number INT2843
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 1933
Personal name Rutkoski, J.
Field link and sequence number I1706399
Miscellaneous information Global Wheat Program
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 2092
Personal name Poland, J.A.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 4675
Personal name Bergstrom, G.C.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 2094
Personal name Sorrells, M.E.
773 0# - HOST ITEM ENTRY
Record control number u444762
International Standard Serial Number 1432-2242 (Revista en electrónico)
Place, publisher, and date of publication Berlin (Germany) : Springer-Verlag Heidelberg
Title Theoretical and Applied Genetics
Related parts v. 130, no. 7, p. 1415–1430
856 4# - ELECTRONIC LOCATION AND ACCESS
Uniform Resource Identifier https://hdl.handle.net/10883/18272
Link text Open Access through DSpace
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Source of classification or shelving scheme Dewey Decimal Classification
Koha item type Article
Suppress in OPAC No
Holdings
Date last seen Total Checkouts Price effective from Koha item type Lost status Source of classification or shelving scheme Damaged status Not for loan Collection code Withdrawn status Home library Current library Date acquired
04/26/2017   04/26/2017 Article Not Lost Dewey Decimal Classification     CIMMYT Staff Publications Collection   CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 04/26/2017

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