MARC details
| 000 -LEADER |
|---|
| fixed length control field |
03089nab a22004217a 4500 |
| 001 - CONTROL NUMBER |
|---|
| control field |
57119 |
| 003 - CONTROL NUMBER IDENTIFIER |
|---|
| control field |
MX-TxCIM |
| 005 - DATE AND TIME OF LATEST TRANSACTION |
|---|
| control field |
20240919021002.0 |
| 008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION |
|---|
| fixed length control field |
151112s2015 xxu|||p|op||| 00| 0 eng d |
| 022 ## - INTERNATIONAL STANDARD SERIAL NUMBER |
|---|
| International Standard Serial Number |
1940-3372 |
| 024 8# - OTHER STANDARD IDENTIFIER |
|---|
| Standard number or code |
https://doi.org/10.3835/plantgenome2014.09.0046 |
| 040 ## - CATALOGING SOURCE |
|---|
| Original cataloging agency |
MX-TxCIM |
| 041 ## - LANGUAGE CODE |
|---|
| Language code of text/sound track or separate title |
eng |
| 100 1# - MAIN ENTRY--PERSONAL NAME |
|---|
| 9 (RLIN) |
1933 |
| Personal name |
Rutkoski, J. |
| Miscellaneous information |
Global Wheat Program |
| Field link and sequence number |
I1706399 |
| 245 10 - TITLE STATEMENT |
|---|
| Title |
Efficient use of historical data for genomic selection : |
| Remainder of title |
a case study of stem rust resistance in wheat |
| 260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT) |
|---|
| Place of publication, distribution, etc. |
USA : |
| Name of publisher, distributor, etc. |
CSSA, |
| Date of publication, distribution, etc. |
2015. |
| 500 ## - GENERAL NOTE |
|---|
| General note |
Open Access |
| 500 ## - GENERAL NOTE |
|---|
| General note |
Peer review |
| 520 ## - SUMMARY, ETC. |
|---|
| Summary, etc. |
Genomic selection (GS) is a methodology that can improve crop breeding efficiency. To implement GS, a training population (TP) with phenotypic and genotypic data is required to train a statistical model used to predict genotyped selection candidates (SCs). A key factor impacting prediction accuracy is the relationship between the TP and the SCs. This study used empirical data for quantitative adult plant resistance to stem rust of wheat (Triticum aestivum L.) to investigate the utility of a historical TP (TPH) compared with a population-specific TP (TPPS), the potential for TPH optimization, and the utility of TPH data when close relative data is available for training. We found that, depending on the population size, a TPPS was 1.5 to 4.4 times more accurate than a TPH, and TPH optimization based on the mean of the generalized coefficient of determination or prediction error variance enabled the selection of subsets that led to significantly higher accuracy than randomly selected subsets. Retaining historical data when data on close relatives were available lead to a 11.9% increase in accuracy, at best, and a 12% decrease in accuracy, at worst, depending on the heritability. We conclude that historical data could be used successfully to initiate a GS program, especially if the dataset is very large and of high heritability. Training population optimization would be useful for the identification of TPH subsets to phenotype additional traits. However, after model updating, discarding historical data may be warranted. More studies are needed to determine if these observations represent general trends. |
| 536 ## - FUNDING INFORMATION NOTE |
|---|
| Text of note |
Global Wheat Program |
| 546 ## - LANGUAGE NOTE |
|---|
| Language note |
Text in english |
| 591 ## - CATALOGING NOTES |
|---|
| Number of CIMMYT Informa |
CIMMYT Informa No. 1956 |
| 594 ## - STAFFID |
|---|
| StaffID |
INT0610 |
| 594 ## - STAFFID |
|---|
| StaffID |
INT2843 |
| 594 ## - STAFFID |
|---|
| StaffID |
I1706399 |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| Topical term or geographic name as entry element |
Rusts |
| Miscellaneous information |
AGROVOC |
| Source of heading or term |
|
| 9 (RLIN) |
1251 |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| Topical term or geographic name as entry element |
Wheat |
| Miscellaneous information |
AGROVOC |
| Source of heading or term |
|
| 9 (RLIN) |
1310 |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| 9 (RLIN) |
1132 |
| Topical term or geographic name as entry element |
Genomics |
| Source of heading or term |
AGROVOC |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Singh, R.P. |
| Miscellaneous information |
Global Wheat Program |
| Field link and sequence number |
INT0610 |
| 9 (RLIN) |
825 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Huerta-Espino, J. |
| Miscellaneous information |
Global Wheat Program |
| Field link and sequence number |
CHUE01 |
| 9 (RLIN) |
397 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| 9 (RLIN) |
867 |
| Personal name |
Bhavani, S. |
| Field link and sequence number |
INT2843 |
| Miscellaneous information |
Global Wheat Program |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| 9 (RLIN) |
2092 |
| Personal name |
Poland, J.A. |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| 9 (RLIN) |
2093 |
| Personal name |
Jannink, J.L. |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| 9 (RLIN) |
2094 |
| Personal name |
Sorrells, M.E. |
| 773 0# - HOST ITEM ENTRY |
|---|
| Record control number |
u94757 |
| Main entry heading |
Crop Science Society of America |
| International Standard Serial Number |
1940-3372 |
| Place, publisher, and date of publication |
Madison, WI (USA) : CSSA, 2015. |
| Title |
The Plant Genome |
| Related parts |
v. 8, no. 1, p. 1-10 |
| 856 4# - ELECTRONIC LOCATION AND ACCESS |
|---|
| Link text |
Open Access through DSpace |
| Uniform Resource Identifier |
http://hdl.handle.net/10883/16815 |
| 942 ## - ADDED ENTRY ELEMENTS (KOHA) |
|---|
| Source of classification or shelving scheme |
Dewey Decimal Classification |
| Koha item type |
Article |
| Suppress in OPAC |
No |