MARC details
| 000 -LEADER |
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| fixed length control field |
02955nab a22003857a 4500 |
| 001 - CONTROL NUMBER |
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| control field |
G94896 |
| 003 - CONTROL NUMBER IDENTIFIER |
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| control field |
MX-TxCIM |
| 005 - DATE AND TIME OF LATEST TRANSACTION |
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| control field |
20220704150302.0 |
| 008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION |
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| fixed length control field |
220704s2010 xxu|||p|op||| 00| 0 eng d |
| 022 ## - INTERNATIONAL STANDARD SERIAL NUMBER |
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| International Standard Serial Number |
1940-3372 (Online) |
| 024 8# - OTHER STANDARD IDENTIFIER |
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| Standard number or code |
https://doi.org/10.3835/plantgenome2010.06.0013 |
| 040 ## - CATALOGING SOURCE |
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| Original cataloging agency |
MX-TxCIM |
| 041 ## - LANGUAGE CODE |
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| Language code of text/sound track or separate title |
eng |
| 090 ## - LOCALLY ASSIGNED LC-TYPE CALL NUMBER (OCLC); LOCAL CALL NUMBER (RLIN) |
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| Classification number (OCLC) (R) ; Classification number, CALL (RLIN) (NR) |
CIS-6280 |
| 100 1# - MAIN ENTRY--PERSONAL NAME |
|---|
| Personal name |
Córdoba, J.M. |
| 9 (RLIN) |
27966 |
| 245 10 - TITLE STATEMENT |
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| Title |
Identification and mapping of simple sequence repeat markers from common bean (phaseolus vulgaris l.) bacterial artificial chromosome end sequences for genome characterization and genetic-physical map integration |
| 260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT) |
|---|
| Place of publication, distribution, etc. |
Madison, WI (USA) : |
| Name of publisher, distributor, etc. |
CSSA : |
| -- |
Wiley, |
| Date of publication, distribution, etc. |
2010. |
| 500 ## - GENERAL NOTE |
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| General note |
Peer-review: Yes - Open Access: Yes|http://science.thomsonreuters.com/cgi-bin/jrnlst/jlresults.cgi?PC=MASTER&ISSN=1940-3372 |
| 500 ## - GENERAL NOTE |
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| General note |
Peer review |
| 500 ## - GENERAL NOTE |
|---|
| General note |
Open Access |
| 520 ## - SUMMARY, ETC. |
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| Summary, etc. |
Microsatellite markers or simple sequence repeat (SSR) loci are useful for diversity characterization and genetic?physical mapping. Different in silico microsatellite search methods have been developed for mining bacterial artificial chromosome (BAC) end sequences for SSRs. The overall goal of this study was genome characterization based on SSRs in 89,017 BAC end sequences (BESs) from the G19833 common bean (Phaseolus vulgaris L.) library. Another objective was to identify new SSR taking into account three tandem motif identification programs (Automated Microsatellite Marker Development [AMMD], Tandem Repeats Finder [TRF], and SSRLocator [SSRL]). Among the microsatellite search engines, SSRL identified the highest number of SSRs; however, when primer design was attempted, the number dropped due to poor primer design regions. Automated Microsatellite Marker Development software identified many SSRs with valuable AT/TA or AG/TC motifs, while TRF found fewer SSRs and produced no primers. A subgroup of 323 AT-rich, di-, and trinucleotide SSRs were selected from the AMMD results and used in a parental survey with DOR364 and G19833, of which 75 could be mapped in the corresponding population; these represented 4052 BAC clones. Together with 92 previously mapped BES- and 114 non-BES-derived markers, a total of 280 SSRs were included in the polymerase chain reaction (PCR)-based map, integrating a total of 8232 BAC clones in 162 contigs from the physical map. |
| 546 ## - LANGUAGE NOTE |
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| Language note |
Text in English |
| 595 ## - COLLECTION |
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| Collection |
CIMMYT Staff Publications Collection |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
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| 9 (RLIN) |
9039 |
| Topical term or geographic name as entry element |
Phaseolus vulgaris |
| Source of heading or term |
AGROVOC |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| 9 (RLIN) |
1848 |
| Topical term or geographic name as entry element |
Genetic markers |
| Source of heading or term |
AGROVOC |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| 9 (RLIN) |
2261 |
| Topical term or geographic name as entry element |
Microsatellites |
| Source of heading or term |
AGROVOC |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| 9 (RLIN) |
4190 |
| Topical term or geographic name as entry element |
Genetic maps |
| Source of heading or term |
AGROVOC |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Chavarro, C. |
| 9 (RLIN) |
27967 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Rojas, F. |
| 9 (RLIN) |
27968 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Muñoz, C. |
| 9 (RLIN) |
27969 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Blair, M.W. |
| 9 (RLIN) |
21809 |
| 773 0# - HOST ITEM ENTRY |
|---|
| Title |
Plant Genome |
| Related parts |
v. 3, no. 3, p. 154-165 |
| Place, publisher, and date of publication |
Madison, WI (USA) : CSSA : Wiley, 2010. |
| Record control number |
G94757 |
| International Standard Serial Number |
1940-3372 |
| 856 4# - ELECTRONIC LOCATION AND ACCESS |
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| Uniform Resource Identifier |
http://hdl.handle.net/10883/1845 |
| Link text |
Open Access through DSpace |
| 942 ## - ADDED ENTRY ELEMENTS (KOHA) |
|---|
| Koha item type |
Article |
| Source of classification or shelving scheme |
Dewey Decimal Classification |
| Suppress in OPAC |
No |