Knowledge Center Catalog

Development of wild barley-derived DArT markers and their integration into a barley consensus map (Record no. 28295)

MARC details
000 -LEADER
fixed length control field 03020nab a22003857a 4500
001 - CONTROL NUMBER
control field G94557
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20171220113526.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 121211b |||p||p||||||| |z||| |
022 ## - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 1572-9788 (Revista en electrónico)
022 0# - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 1380-3743
024 8# - OTHER STANDARD IDENTIFIER
Standard number or code https://doi.org/10.1007/s11032-010-9415-3
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
100 1# - MAIN ENTRY--PERSONAL NAME
Personal name Alsop, B.P.
245 00 - TITLE STATEMENT
Title Development of wild barley-derived DArT markers and their integration into a barley consensus map
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Date of publication, distribution, etc. 2011
500 ## - GENERAL NOTE
General note Peer-review: Yes - Open Access: Yes|http://science.thomsonreuters.com/cgi-bin/jrnlst/jlresults.cgi?PC=MASTER&ISSN=1380-3743
520 ## - SUMMARY, ETC.
Summary, etc. Wild barley-specific genomic libraries were developed for the purpose of creating a -comprehensive? genomic representation of the primary Hordeum genepool capable of more robust genotyping of barley. In order to enrich for wild barley-specific sequences in the DArT libraries, suppression subtraction hybridization (SSH) was performed using cultivated barley as the subtraction driver and wild barley as the tester. Four doubled-haploid populations were genotyped with the comprehensive barley DArT array, including two from wild × cultivated crosses (Damon/Harrington and Shechem/Harrington) and two from cultivated × cultivated crosses (Albacete/Barbarrouse and TX9425/Naso Nijo). Analysis of genotyping data revealed that the SSH process was somewhat ineffective at enriching for unique sequences in this application of DArT marker development. However, the addition of markers derived from wild barley proved to be an effective means for increasing the number of polymorphic markers obtainable from a single DArT assay. Genetic maps of the four component populations were developed and 607 newly developed DArT markers were integrated with a barley consensus map to create a new synthetic map of the barley genome containing 3542 markers. This significantly increased the resolution of the consensus map and improved the power of the map to provide a reference for profiling genetic diversity within the primary Hordeum genepool. The improvement in the genotyping capability of the comprehensive DArT genomic representation and the higher resolution of the synthetic map facilitates an even greater flexibility of DArT markers to be utilized as a fast, high-throughput platform for molecular marker-based barley breeding.
536 ## - FUNDING INFORMATION NOTE
Text of note Genetic Resources Program
546 ## - LANGUAGE NOTE
Language note English
591 ## - CATALOGING NOTES
Affiliation No CIMMYT affiliation
594 ## - STAFFID
StaffID INT3049
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Diversity arrays technology
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Hordeum vulgare subsp. spontaneum
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Synthetic map
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Farre, A.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Kilian, A.,
Relator term coaut.
9 (RLIN) 1409
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Romagosa, I.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Steffenson, B.J.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Wang, J.M.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Zhou, M.X.,
Relator term coaut.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 885
Personal name Wenzl, P.
Miscellaneous information Genetic Resources Program
Field link and sequence number INT3049
Relator term coaut.
773 0# - HOST ITEM ENTRY
Title Molecular Breeding
Related parts v. 27, no. 1, p. 77-92
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Koha item type Article
Source of classification or shelving scheme Dewey Decimal Classification
Holdings
Date last seen Total Checkouts Price effective from Koha item type Lost status Damaged status Not for loan Collection code Withdrawn status Home library Current library Date acquired
07/05/2017   07/05/2017 Article Not Lost     Reprints Collection   CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 07/05/2017

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