Knowledge Center Catalog

Isolated chromosomes as a new and efficient source of DArT markers for the saturation of genetic maps (Record no. 28293)

MARC details
000 -LEADER
fixed length control field 03206nab a22004697a 4500
001 - CONTROL NUMBER
control field G94554
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20230728224238.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 210805t2010 gw |||p|op||| 00| 0 eng d
022 ## - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 1432-2242 (Online)
022 ## - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 0040-5752
024 8# - OTHER STANDARD IDENTIFIER
Standard number or code https://doi.org/10.1007/s00122-010-1323-8
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
041 ## - LANGUAGE CODE
Language code of text/sound track or separate title eng
090 ## - LOCALLY ASSIGNED LC-TYPE CALL NUMBER (OCLC); LOCAL CALL NUMBER (RLIN)
Classification number (OCLC) (R) ; Classification number, CALL (RLIN) (NR) CIS-6125
100 1# - MAIN ENTRY--PERSONAL NAME
9 (RLIN) 885
Personal name Wenzl, P.
Miscellaneous information Genetic Resources Program
Field link and sequence number INT3049
245 10 - TITLE STATEMENT
Title Isolated chromosomes as a new and efficient source of DArT markers for the saturation of genetic maps
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Place of publication, distribution, etc. Berlin (Germany) :
Name of publisher, distributor, etc. Springer,
Date of publication, distribution, etc. 2010.
500 ## - GENERAL NOTE
General note Peer review
500 ## - GENERAL NOTE
General note Peer-review: Yes - Open Access: Yes|http://science.thomsonreuters.com/cgi-bin/jrnlst/jlresults.cgi?PC=MASTER&ISSN=0040-5752
520 ## - SUMMARY, ETC.
Summary, etc. We describe how the diversity arrays technology (DArT) can be coupled with chromosome sorting to increase the density of genetic maps in specific genome regions. Chromosome 3B and the short arm of chromosome 1B (1BS) of wheat were isolated by flow cytometric sorting and used to develop chromosome- and chromosome arm-enriched genotyping arrays containing 2,688 3B clones and 384 1BS clones. Linkage analysis showed that 553 of the 711 polymorphic 3B-derived markers (78%) mapped to chromosome 3B, and 59 of the 68 polymorphic 1BS-derived markers (87%) mapped to chromosome 1BS, confirming the efficiency of the chromosome-sorting approach. To demonstrate the potential for saturation of genetic maps, we constructed a consensus map of chromosome 3B using 19 mapping populations, including some that were genotyped with the 3B-enriched array. The 3B-derived DArT markers doubled the number of genetic loci covered. The resulting consensus map, probably the densest genetic map of 3B available to this date, contains 939 markers (779 DArTs and 160 other markers) that segregate on 304 genetically distinct loci. Importantly, only 2,688 3B-derived clones (probes) had to be screened to obtain almost twice as many polymorphic 3B markers (510) as identified by screening approximately 70,000 whole genome-derived clones (269). Since an enriched DArT array can be developed from less than 5 ng of chromosomal DNA, a quantity which can be obtained within 1 h of sorting, this approach can be readily applied to any crop for which chromosome sorting is available.
536 ## - FUNDING INFORMATION NOTE
Text of note Genetic Resources Program
546 ## - LANGUAGE NOTE
Language note Text in English
591 ## - CATALOGING NOTES
Affiliation Springer
594 ## - STAFFID
StaffID INT3049
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 1130
Topical term or geographic name as entry element Genetics
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 2084
Topical term or geographic name as entry element Chromosome mapping
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 4190
Topical term or geographic name as entry element Genetic maps
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 21890
Personal name Suchánková, P.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 456
Personal name Carling, J.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 21891
Personal name Šimková, H.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 10451
Personal name Huttner, E.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 21892
Personal name Kubaláková, M.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 21893
Personal name Sourdille, P.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 21894
Personal name Paul, E.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 5160
Personal name Feuillet, C.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 1409
Personal name Kilian, A.
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 21895
Personal name Doležel, J.
773 0# - HOST ITEM ENTRY
Title Theoretical and Applied Genetics
Related parts v. 121, no. 3, p. 465-474
Place, publisher, and date of publication Berlin (Germany) : Springer, 2010.
Record control number G444762
International Standard Serial Number 0040-5752
856 4# - ELECTRONIC LOCATION AND ACCESS
Link text Access only for CIMMYT Staff
Uniform Resource Identifier https://hdl.handle.net/20.500.12665/287
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Koha item type Article
Source of classification or shelving scheme Dewey Decimal Classification
Suppress in OPAC No
Holdings
Date last seen Total Checkouts Full call number Price effective from Koha item type Lost status Source of classification or shelving scheme Damaged status Not for loan Collection code Withdrawn status Home library Current library Date acquired
07/05/2017   CIS-6125 07/05/2017 Article Not Lost Dewey Decimal Classification     CIMMYT Staff Publications Collection   CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 07/05/2017

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