Knowledge Center Catalog

Genetic analysis and characterization of a new maize association mapping panel for quantitative trait loci dissection (Record no. 28091)

MARC details
000 -LEADER
fixed length control field 03090nab a22005057a 4500
001 - CONTROL NUMBER
control field G94112
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20230810163419.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 210805t2010 gw |||p|op||| 00| 0 eng d
022 ## - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 1432-2242 (Online)
022 0# - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 0040-5752
024 8# - OTHER STANDARD IDENTIFIER
Standard number or code https://doi.org/10.1007/s00122-010-1320-y
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
041 ## - LANGUAGE CODE
Language code of text/sound track or separate title eng
090 ## - LOCALLY ASSIGNED LC-TYPE CALL NUMBER (OCLC); LOCAL CALL NUMBER (RLIN)
Classification number (OCLC) (R) ; Classification number, CALL (RLIN) (NR) CIS-5999
100 0# - MAIN ENTRY--PERSONAL NAME
Personal name XiaoHong Yang
9 (RLIN) 19531
245 10 - TITLE STATEMENT
Title Genetic analysis and characterization of a new maize association mapping panel for quantitative trait loci dissection
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Place of publication, distribution, etc. Berlin (Germany) :
Name of publisher, distributor, etc. Springer,
Date of publication, distribution, etc. 2010.
500 ## - GENERAL NOTE
General note Peer review
500 ## - GENERAL NOTE
General note Peer-review: Yes - Open Access: Yes|http://science.thomsonreuters.com/cgi-bin/jrnlst/jlresults.cgi?PC=MASTER&ISSN=0040-5752
520 ## - SUMMARY, ETC.
Summary, etc. Association mapping based on the linkage disequilibrium provides a promising tool to identify genes responsible for quantitative variations underlying complex traits. Presented here is a maize association mapping panel consisting of 155 inbred lines with mainly temperate germplasm, which was phenotyped for 34 traits and genotyped using 82 SSRs and 1,536 SNPs. Abundant phenotypic and genetic diversities were observed within the panel based on the phenotypic and genotypic analysis. A model-based analysis using 82 SSRs assigned all inbred lines to two groups with eight subgroups. The relative kinship matrix was calculated using 884 SNPs with minor allele frequency ≥20% indicating that no or weak relationships were identified for most individual pairs. Three traits (total tocopherol content in maize kernel, plant height and kernel length) and 1,414 SNPs with missing data <20% were used to evaluate the performance of four models for association mapping analysis. For all traits, the model controlling relative kinship (K) performed better than the model controlling population structure (Q), and similarly to the model controlling both population structure and relative kinship (Q + K) in this panel. Our results suggest this maize panel can be used for association mapping analysis targeting multiple agronomic and quality traits with optimal association model.
546 ## - LANGUAGE NOTE
Language note Text in English
591 ## - CATALOGING NOTES
Affiliation Springer
595 ## - COLLECTION
Collection CIMMYT Staff Publications Collection
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 2084
Topical term or geographic name as entry element Chromosome mapping
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 1173
Topical term or geographic name as entry element Maize
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 1853
Topical term or geographic name as entry element Quantitative Trait Loci
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Jianbing Yan
9 (RLIN) 398
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Shah, T.
9 (RLIN) 17711
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Warburton, M.L.
9 (RLIN) 4138
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name Qing Li
9 (RLIN) 17870
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name Li Lin
9 (RLIN) 19527
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name Yufeng Gao
9 (RLIN) 21870
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name Yuchao Chai
9 (RLIN) 21871
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name Zhiyuan Fu
9 (RLIN) 19693
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name Yi Zhou
9 (RLIN) 20404
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name ShuTu Xu
9 (RLIN) 19530
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name Guanghong Bai
9 (RLIN) 21872
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name Yijiang Meng
9 (RLIN) 20161
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name Yanping Zheng
9 (RLIN) 20405
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name JianSheng Li
9 (RLIN) 19532
773 0# - HOST ITEM ENTRY
Title Theoretical and Applied Genetics
Related parts v. 121, no. 3, p. 417-431
Place, publisher, and date of publication Berlin (Germany) : Springer, 2010.
Record control number G444762
International Standard Serial Number 0040-5752
856 4# - ELECTRONIC LOCATION AND ACCESS
Uniform Resource Identifier https://hdl.handle.net/20.500.12665/293
Link text Access only for CIMMYT Staff
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Koha item type Article
Source of classification or shelving scheme Dewey Decimal Classification
Suppress in OPAC No
Holdings
Date last seen Total Checkouts Full call number Price effective from Koha item type Lost status Damaged status Not for loan Collection code Withdrawn status Home library Current library Date acquired
07/03/2017   CIS-5999 07/03/2017 Article Not Lost     CIMMYT Staff Publications Collection   CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 07/03/2017

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