MARC details
| 000 -LEADER |
|---|
| fixed length control field |
03769nab a22004577a 4500 |
| 001 - CONTROL NUMBER |
|---|
| control field |
G93890 |
| 003 - CONTROL NUMBER IDENTIFIER |
|---|
| control field |
MX-TxCIM |
| 005 - DATE AND TIME OF LATEST TRANSACTION |
|---|
| control field |
20220511225431.0 |
| 008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION |
|---|
| fixed length control field |
220511s2010 xxk|||p|op||| 00| 0 eng d |
| 022 ## - INTERNATIONAL STANDARD SERIAL NUMBER |
|---|
| International Standard Serial Number |
2041-2851 (Online) |
| 024 8# - OTHER STANDARD IDENTIFIER |
|---|
| Standard number or code |
https://doi.org/10.1093/aobpla/plq008 |
| 040 ## - CATALOGING SOURCE |
|---|
| Original cataloging agency |
MX-TxCIM |
| 041 ## - LANGUAGE CODE |
|---|
| Language code of text/sound track or separate title |
eng |
| 090 ## - LOCALLY ASSIGNED LC-TYPE CALL NUMBER (OCLC); LOCAL CALL NUMBER (RLIN) |
|---|
| Classification number (OCLC) (R) ; Classification number, CALL (RLIN) (NR) |
CIS-5879 |
| 100 1# - MAIN ENTRY--PERSONAL NAME |
|---|
| 9 (RLIN) |
864 |
| Personal name |
Shrestha, R. |
| Miscellaneous information |
Genetic Resources Program |
| Field link and sequence number |
INT2832 |
| 245 10 - TITLE STATEMENT |
|---|
| Title |
Multifunctional crop trait ontology for breeders' data : |
| Remainder of title |
field book, annotation, data discovery and semantic enrichment of the literature |
| 260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT) |
|---|
| Place of publication, distribution, etc. |
United Kingdom : |
| Name of publisher, distributor, etc. |
Oxford University Press, |
| Date of publication, distribution, etc. |
2010. |
| 500 ## - GENERAL NOTE |
|---|
| General note |
Peer-review: Yes - Open Access: Yes|http://science.thomsonreuters.com/cgi-bin/jrnlst/jlresults.cgi?PC=MASTER&ISSN=2041-2851 |
| 500 ## - GENERAL NOTE |
|---|
| General note |
Peer review |
| 500 ## - GENERAL NOTE |
|---|
| General note |
Open Access |
| 520 ## - SUMMARY, ETC. |
|---|
| Summary, etc. |
Background and aims: Agricultural crop databases maintained in gene banks of the Consultative Group on International Agricultural Research (CGIAR) are valuable sources of information for breeders. These databases provide comparative phenotypic and genotypic information that can help elucidate functional aspects of plant and agricultural biology. To facilitate data sharing within and between these databases and the retrieval of information, the crop ontology (CO) database was designed to provide controlled vocabulary sets for several economically important plant species. Methodology: Existing public ontologies and equivalent catalogues of concepts covering the range of crop science information and descriptors for crops and crop-related traits were collected from breeders, physiologists, agronomists, and researchers in the CGIAR consortium. For each crop, relationships between terms were identified and crop-specific trait ontologies were constructed following the Open Biomedical Ontologies (OBO) format standard using the OBO-Edit tool. All terms within an ontology were assigned a globally unique CO term identifier. Principal results: The CO currently comprises crop-specific traits for chickpea (Cicer arietinum), maize (Zea mays), potato (Solanum tuberosum), rice (Oryza sativa), sorghum (Sorghum spp.) and wheat (Triticum spp.). Several plant-structure and anatomy-related terms for banana (Musa spp.), wheat and maize are also included. In addition, multi-crop passport terms are included as controlled vocabularies for sharing information on germplasm. Two web-based online resources were built to make these COs available to the scientific community: the ‘CO Lookup Service’ for browsing the CO; and the ‘Crops Terminizer’, an ontology text mark-up tool. Conclusions: The controlled vocabularies of the CO are being used to curate several CGIAR centres' agronomic databases. The use of ontology terms to describe agronomic phenotypes and the accurate mapping of these descriptions into databases will be important steps in comparative phenotypic and genotypic studies across species and gene-discovery experiments. |
| 536 ## - FUNDING INFORMATION NOTE |
|---|
| Text of note |
Genetic Resources Program |
| 546 ## - LANGUAGE NOTE |
|---|
| Language note |
Text in English |
| 594 ## - STAFFID |
|---|
| StaffID |
INT2832 |
| 595 ## - COLLECTION |
|---|
| Collection |
CIMMYT Staff Publications Collection |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| 9 (RLIN) |
8810 |
| Topical term or geographic name as entry element |
Ontology |
| Source of heading or term |
AGROVOC |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| 9 (RLIN) |
1045 |
| Topical term or geographic name as entry element |
Climate change |
| Source of heading or term |
AGROVOC |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| 9 (RLIN) |
3525 |
| Topical term or geographic name as entry element |
Gene banks |
| Source of heading or term |
AGROVOC |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| 9 (RLIN) |
6207 |
| Topical term or geographic name as entry element |
Data bases |
| Source of heading or term |
AGROVOC |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Arnaud, E. |
| 9 (RLIN) |
4903 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Mauleon, R. |
| 9 (RLIN) |
26748 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Senger, M. |
| 9 (RLIN) |
26742 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Davenport, G. |
| 9 (RLIN) |
20393 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Hancock, D. |
| 9 (RLIN) |
27400 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Morrison, N. |
| 9 (RLIN) |
27401 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
Bruskiewich, R. |
| 9 (RLIN) |
26741 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| Personal name |
McLaren, G. |
| 9 (RLIN) |
27252 |
| 773 0# - HOST ITEM ENTRY |
|---|
| Title |
AoB Plants |
| Related parts |
v. 2010, art. plq008 |
| Place, publisher, and date of publication |
United Kingdom : Oxford University Press, 2010. |
| International Standard Serial Number |
2041-2851 |
| 856 4# - ELECTRONIC LOCATION AND ACCESS |
|---|
| Uniform Resource Identifier |
http://hdl.handle.net/10883/1808 |
| Link text |
Open Access through DSpace |
| 942 ## - ADDED ENTRY ELEMENTS (KOHA) |
|---|
| Koha item type |
Article |
| Source of classification or shelving scheme |
Dewey Decimal Classification |
| Suppress in OPAC |
No |