Knowledge Center Catalog

Inclusive composite interval mapping of quantitative trait genes (Record no. 27881)

MARC details
000 -LEADER
fixed length control field 03045nab a22004217a 4500
001 - CONTROL NUMBER
control field G93482
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20220622225131.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 210804s2009 cc |||p|op||| 00| 0 chi d
022 0# - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 0496-3490
022 0# - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 1875-2780 (Online)
024 8# - OTHER STANDARD IDENTIFIER
Standard number or code https://doi.org/10.3724/SP.J.1006.2009.00239
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
041 ## - LANGUAGE CODE
Language code of text/sound track or separate title chi
090 ## - LOCALLY ASSIGNED LC-TYPE CALL NUMBER (OCLC); LOCAL CALL NUMBER (RLIN)
Classification number (OCLC) (R) ; Classification number, CALL (RLIN) (NR) CIS-5624
100 1# - MAIN ENTRY--PERSONAL NAME
9 (RLIN) 842
Personal name Jiankang Wang
Miscellaneous information Genetic Resources Program
Field link and sequence number INT2542
245 10 - TITLE STATEMENT
Title Inclusive composite interval mapping of quantitative trait genes
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Place of publication, distribution, etc. Beijing (China) :
Name of publisher, distributor, etc. Science Press,
Date of publication, distribution, etc. 2009.
500 ## - GENERAL NOTE
General note Peer review
500 ## - GENERAL NOTE
General note Open Access
500 ## - GENERAL NOTE
General note Peer-review: No - Open Access: Yes|http://211.155.251.148:8080/zwxb/EN/column/column81.shtml
520 ## - SUMMARY, ETC.
Summary, etc. Rapid increase in the availability of fine-scale genetic marker maps has led to the intensive use of QTL mapping in the genetic study of quantitative traits. Composite interval mapping (CIM) is one of the most commonly used methods for QTL mapping with populations derived from biparental crosses. However, the algorithm used in CIM cannot completely ensure that the effect of QTL at current testing interval is not absorbed by the background marker variables, and may result in biased estimation of QTL effect. We proposed a statistical method for QTL mapping, which was called inclusive composite interval mapping (ICIM). Two steps were included in ICIM. In the first step, stepwise regression was applied to identify the most significant regression variables. In the second step, a one-dimensional scanning or interval mapping was conducted for detecting additive (and dominance) QTL and a two-dimensional scanning was conducted for detecting digenic epistasis. ICIM provides intuitive statistics for testing additive, dominance and epistasis, and can be used for most experimental populations derived from two inbred parental lines. The EM algorithm used in ICIM has a fast convergence speed and is therefore less computing intensive. ICIM retains all advantages of CIM over interval mapping, and avoids the possible increase of sampling variance and the complicated background marker selection process in CIM. A doubled haploid (DH) population in barley was used to demonstrate the application of ICIM in mapping additive QTL and additive by additive interacting QTL.
536 ## - FUNDING INFORMATION NOTE
Text of note Genetic Resources Program
546 ## - LANGUAGE NOTE
Language note Text in English
594 ## - STAFFID
StaffID INT2542
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 1853
Topical term or geographic name as entry element Quantitative Trait Loci
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 2084
Topical term or geographic name as entry element Chromosome mapping
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 9059
Topical term or geographic name as entry element Additive Effect
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Source of heading or term AGROVOC
9 (RLIN) 9058
Topical term or geographic name as entry element Gene Interaction
653 0# - INDEX TERM--UNCONTROLLED
Uncontrolled term Additive amd dominance effects
653 0# - INDEX TERM--UNCONTROLLED
Uncontrolled term Epistatic interaction
653 0# - INDEX TERM--UNCONTROLLED
Uncontrolled term Inclusive composite interval mapping
653 0# - INDEX TERM--UNCONTROLLED
Uncontrolled term QTL mapping
653 0# - INDEX TERM--UNCONTROLLED
Uncontrolled term Quantitative trait
773 0# - HOST ITEM ENTRY
Title Acta Agronomica Sinica
Related parts v. 35, no. 2, p. 239-245
Place, publisher, and date of publication Beijing (China) : Science Press, 2009.
Record control number G446116
International Standard Serial Number 0496-3490
856 4# - ELECTRONIC LOCATION AND ACCESS
Link text Open Access through DSpace
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Koha item type Article
Source of classification or shelving scheme Dewey Decimal Classification
Suppress in OPAC No
Holdings
Date last seen Total Checkouts Full call number Price effective from Koha item type Lost status Source of classification or shelving scheme Damaged status Not for loan Collection code Withdrawn status Home library Current library Date acquired
07/05/2017   CIS-5624 07/05/2017 Article Not Lost Dewey Decimal Classification     CIMMYT Staff Publications Collection   CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 07/05/2017

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