Knowledge Center Catalog

Nucleotide diversity and molecular evolution of the PSY1 gene in Zea mays compared to some other grass species (Record no. 27828)

MARC details
000 -LEADER
fixed length control field 03192nab a22004937a 4500
001 - CONTROL NUMBER
control field G93416
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20211006074518.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 210618s2010 gw |||p|op||| 00| 0 eng d
022 ## - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 1432-2242 (Online)
022 0# - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 0040-5752
024 8# - OTHER STANDARD IDENTIFIER
Standard number or code https://doi.org/10.1007/s00122-009-1188-x
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
041 ## - LANGUAGE CODE
Language code of text/sound track or separate title eng
090 ## - LOCALLY ASSIGNED LC-TYPE CALL NUMBER (OCLC); LOCAL CALL NUMBER (RLIN)
Classification number (OCLC) (R) ; Classification number, CALL (RLIN) (NR) CIS-5953
100 0# - MAIN ENTRY--PERSONAL NAME
Personal name Zhiyuan Fu
9 (RLIN) 19693
245 10 - TITLE STATEMENT
Title Nucleotide diversity and molecular evolution of the PSY1 gene in Zea mays compared to some other grass species
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Place of publication, distribution, etc. Berlin (Germany) :
Name of publisher, distributor, etc. Springer,
Date of publication, distribution, etc. 2010.
500 ## - GENERAL NOTE
General note Peer review
500 ## - GENERAL NOTE
General note Peer-review: Yes - Open Access: Yes|http://science.thomsonreuters.com/cgi-bin/jrnlst/jlresults.cgi?PC=MASTER&ISSN=0040-5752
520 ## - SUMMARY, ETC.
Summary, etc. Phytoene synthase (PSY), which is encoded by the phytoene synthase 1 (PSY1) gene, is the first rate-limiting enzyme in the plant carotenoid biosynthetic pathway. In order to examine the genetic diversity and evolution pattern of PSY1 within the Andropogoneae, sequences of 76 accessions from 5 species (maize, teosinte, tripsacum, coix, and sorghum) of the Andropogoneae were tested, along with 4 accessions of rice (Oryza sativa L.) included as outliers. Both the number and the order of exons and introns were relatively conserved across the species tested. Three domains were identified in the coding sequence, including signal peptide (SP), PSY, and highly conserved squalene synthase (SQS) domain. Although no positive selection signal was detected at an overall coding level among all species tested, the SP domain and the region upstream of the SQS-PSY domain appear to have undergone rapid evolution, as evidenced by a high d (N)/d (S) ratio (>1.0). At the nucleotide level, positive selection and balancing selection were detected only among the yellow maize germplasm and the white maize germplasm, respectively. The phylogenetic tree based on full-length sequences of PSY1-like regions supported the monophyletic theory of the Andropogoneae and the closest relationship between Zea and Tripsacum among the Andropogoneae. Coix, which was theorized to have a closer relationship with maize due to similarities in morphology and chromosome number, has been shown in this study to have diverged relatively early from the other Andropogoneae, including maize.
546 ## - LANGUAGE NOTE
Language note Text in English
591 ## - CATALOGING NOTES
Affiliation Springer
595 ## - COLLECTION
Collection CIMMYT Staff Publications Collection
650 17 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Agriculture
Miscellaneous information AGROVOC
Source of heading or term
9 (RLIN) 1007
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Angiospermae
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Diversity
9 (RLIN) 1078
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element gene
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Gramineae
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Molecular evolution
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Monocotyledones
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Nucleotide
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Spermatophyta
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
9 (RLIN) 1314
Topical term or geographic name as entry element Zea mays
Source of heading or term AGROVOC
650 10 - SUBJECT ADDED ENTRY--TOPICAL TERM
9 (RLIN) 1130
Topical term or geographic name as entry element Genetics
Source of heading or term AGROVOC
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Jianbing Yan
9 (RLIN) 398
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name Yanping Zheng
9 (RLIN) 20405
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Warburton, M.L.
9 (RLIN) 4138
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Crouch, J.H.
9 (RLIN) 5274
700 0# - ADDED ENTRY--PERSONAL NAME
Personal name JianSheng Li
9 (RLIN) 19532
773 0# - HOST ITEM ENTRY
Title Theoretical and Applied Genetics
Related parts v. 120, no. 4, p. 709-720
Place, publisher, and date of publication Berlin (Germany) : Springer, 2010.
Record control number G444762
International Standard Serial Number 0040-5752
856 4# - ELECTRONIC LOCATION AND ACCESS
Uniform Resource Identifier https://hdl.handle.net/20.500.12665/797
Link text Access only for CIMMYT Staff
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Koha item type Article
Source of classification or shelving scheme Dewey Decimal Classification
Suppress in OPAC No
Holdings
Date last seen Total Checkouts Full call number Price effective from Koha item type Lost status Damaged status Not for loan Collection code Withdrawn status Home library Current library Date acquired
07/03/2017   CIS-5953 07/03/2017 Article Not Lost     CIMMYT Staff Publications Collection   CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 07/03/2017

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