Knowledge Center Catalog

Hierarchical multiple-factor analysis for classifying genotypes based on phenotypic and genetic data (Record no. 27816)

MARC details
000 -LEADER
fixed length control field 03291nab a22003737a 4500
001 - CONTROL NUMBER
control field G93402
003 - CONTROL NUMBER IDENTIFIER
control field MX-TxCIM
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20240919020946.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 210409s2010 xxu|||p|op||| 00| 0 eng d
022 ## - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 1435-0653 (Online)
022 ## - INTERNATIONAL STANDARD SERIAL NUMBER
International Standard Serial Number 0011-183X
024 8# - OTHER STANDARD IDENTIFIER
Standard number or code https://doi.org/10.2135/cropsci2009.01.0053
040 ## - CATALOGING SOURCE
Original cataloging agency MX-TxCIM
041 ## - LANGUAGE CODE
Language code of text/sound track or separate title eng
090 ## - LOCALLY ASSIGNED LC-TYPE CALL NUMBER (OCLC); LOCAL CALL NUMBER (RLIN)
Classification number (OCLC) (R) ; Classification number, CALL (RLIN) (NR) CIS-5583
100 1# - MAIN ENTRY--PERSONAL NAME
Personal name Franco, J.
Field link and sequence number CFRN01
Miscellaneous information Formerly Genetic Resources Program
9 (RLIN) 494
245 10 - TITLE STATEMENT
Title Hierarchical multiple-factor analysis for classifying genotypes based on phenotypic and genetic data
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Place of publication, distribution, etc. Madison (USA) :
Name of publisher, distributor, etc. CSSA :
-- Wiley,
Date of publication, distribution, etc. 2010.
500 ## - GENERAL NOTE
General note Peer review
500 ## - GENERAL NOTE
General note Peer-review: Yes - Open Access: Yes|http://science.thomsonreuters.com/cgi-bin/jrnlst/jlresults.cgi?PC=MASTER&ISSN=0011-183X
520 ## - SUMMARY, ETC.
Summary, etc. A numerical classification problem encountered by breeders and gene-bank curators is how to partition the original heterogeneous population of genotypes into non-overlapping homogeneous subpopulations. The measure of distance that may be defined depends on the type of variables measured (i.e., continuous and/or discrete). The key points are whether and how a distance may be defined using all types of variables to achieve effective classification. The objective of this research was to propose an approach that combines the use of hierarchical multiple-factor analysis (HMFA) and the two-stage Ward Modified Location Model (Ward-MLM) classification strategy that allows (i) combining different types of phenotypic and genetic data simultaneously; (ii) balancing out the effects of the different phenotypic, genetic, continuous, and discrete variables; and (iii) measuring the contribution of each original variable to the new principal axes (PAs). Of the two strategies applied for developing PA scores to be used for clustering genotypes, the strategy that used the first few PA scores to which phenotypic and genetic variables each contributed 50% (i.e., a balanced contribution) formed better groups than those formed by the strategy that used a large number of PA scores explaining 95% of total variability. Phenotypic variables account for much variability in the initial PA; then their contributions decrease. The importance of genetic variables increases in later PAs. Results showed that various phenotypic and genetic variables made important contributions to the new PA. The HMFA uses all phenotypic and genetic variables simultaneously and, in conjunction with the Ward-MLM method, it offers an effective unifying approach for the classification of breeding genotypes into homogeneous groups and for the formation of core subsets for genetic resource conservation.
536 ## - FUNDING INFORMATION NOTE
Text of note Genetic Resources Program
546 ## - LANGUAGE NOTE
Language note Text in English
591 ## - CATALOGING NOTES
Affiliation Crop Science Society of America (CSSA)
594 ## - STAFFID
StaffID CCJL01
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
9 (RLIN) 1134
Topical term or geographic name as entry element Genotypes
Source of heading or term AGROVOC
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
9 (RLIN) 3634
Topical term or geographic name as entry element Phenotypes
Source of heading or term AGROVOC
650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name as entry element Genetic variation
Source of heading or term AGROVOC
9 (RLIN) 1129
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Crossa, J.
Miscellaneous information Genetic Resources Program
Field link and sequence number CCJL01
9 (RLIN) 59
700 1# - ADDED ENTRY--PERSONAL NAME
9 (RLIN) 19533
Personal name Desphande, S.
773 0# - HOST ITEM ENTRY
Title Crop Science
Related parts v. 50, no. 1, p. 105-117
Place, publisher, and date of publication Madison (USA) : CSSA : Wiley, 2010.
Record control number G444244
International Standard Serial Number 1435-0653
856 4# - ELECTRONIC LOCATION AND ACCESS
Link text Access only for CIMMYT Staff
Uniform Resource Identifier https://hdl.handle.net/20.500.12665/303
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Koha item type Article
Source of classification or shelving scheme Dewey Decimal Classification
Suppress in OPAC No
Holdings
Date last seen Total Checkouts Full call number Price effective from Koha item type Lost status Source of classification or shelving scheme Damaged status Not for loan Collection code Withdrawn status Home library Current library Date acquired
07/05/2017   CIS-5583 07/05/2017 Article Not Lost Dewey Decimal Classification     CIMMYT Staff Publications Collection   CIMMYT Knowledge Center: John Woolston Library CIMMYT Knowledge Center: John Woolston Library 07/05/2017

International Maize and Wheat Improvement Center (CIMMYT) © Copyright 2021.
Carretera México-Veracruz. Km. 45, El Batán, Texcoco, México, C.P. 56237.
If you have any question, please contact us at
CIMMYT-Knowledge-Center@cgiar.org