MARC details
| 000 -LEADER |
|---|
| fixed length control field |
03401nab a22004577a 4500 |
| 001 - CONTROL NUMBER |
|---|
| control field |
G82477 |
| 003 - CONTROL NUMBER IDENTIFIER |
|---|
| control field |
MX-TxCIM |
| 005 - DATE AND TIME OF LATEST TRANSACTION |
|---|
| control field |
20240919020945.0 |
| 008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION |
|---|
| fixed length control field |
210802s2005 xxu|||p|op||| 00| 0 eng d |
| 022 ## - INTERNATIONAL STANDARD SERIAL NUMBER |
|---|
| International Standard Serial Number |
1085-7117 |
| 022 ## - INTERNATIONAL STANDARD SERIAL NUMBER |
|---|
| International Standard Serial Number |
1537-2693 (Online) |
| 024 8# - OTHER STANDARD IDENTIFIER |
|---|
| Standard number or code |
https://doi.org/10.1198/108571105X58216 |
| 040 ## - CATALOGING SOURCE |
|---|
| Original cataloging agency |
MX-TxCIM |
| 041 ## - LANGUAGE CODE |
|---|
| Language code of text/sound track or separate title |
eng |
| 090 ## - LOCALLY ASSIGNED LC-TYPE CALL NUMBER (OCLC); LOCAL CALL NUMBER (RLIN) |
|---|
| Classification number (OCLC) (R) ; Classification number, CALL (RLIN) (NR) |
CIS-4551 |
| 100 1# - MAIN ENTRY--PERSONAL NAME |
|---|
| Personal name |
Crossa, J. |
| Miscellaneous information |
Genetic Resources Program |
| Field link and sequence number |
CCJL01 |
| 9 (RLIN) |
59 |
| 245 10 - TITLE STATEMENT |
|---|
| Title |
Using linear-bilinear models for studying gene expression x treatment interaction in microarray experiments |
| 260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT) |
|---|
| Place of publication, distribution, etc. |
New York (USA) : |
| Name of publisher, distributor, etc. |
Springer, |
| Date of publication, distribution, etc. |
2005. |
| 340 ## - PHYSICAL MEDIUM |
|---|
| Material base and configuration |
Printed|Computer File |
| 500 ## - GENERAL NOTE |
|---|
| General note |
Peer review |
| 500 ## - GENERAL NOTE |
|---|
| General note |
Peer-review: Yes - Open Access: Yes|http://science.thomsonreuters.com/cgi-bin/jrnlst/jlresults.cgi?PC=MASTER&ISSN=1085-7117 |
| 520 ## - SUMMARY, ETC. |
|---|
| Summary, etc. |
In microarray experiments, the global and the specific gene expression in the two-way table of gene x treatments (or tissues) can be studied using linear-bilinear models that incorporate the main effects of genes (G), treatment (T), and gene x treatment interaction (G x T). The plot of the first two axes obtained from the singular value decomposition of the bilinear (multiplicative) term of these models (biplot) facilitates the interpretation of the gene expression patterns. In this study, two microarray datasets were used to illustrate how two linear-bilinear models, the additive main effect and multiplicative interaction (AMMI) and the treatment regression model (TREG) and their biplots can be used to determine the overall gene expression pattern across treatments (or tissues) and for specific treatments. Dataset 1 had 5,339 genes and the objective was to identify genes with modified expression during maize (Zea mays) seed development in response to different parental ploidy levels. In Dataset 2, the aim was to study gene expression in 15 tissue samples with different levels of development of breast cancer when compared with the expression of the genes in noninfected tissues. The results from the analyses of Dataset 1 showed that the biplots of the AMMI and TREG models allow identification of subsets of genes and treatments with noncrossover G x T interaction or with important levels of crossover G x T. Results from Dataset 2 showed that the TREG model and its biplot facilitates the identification of genes with high expression in all tumor cells. Also, the TREG biplots allowed identification of subsets of genes with a low level of gene x tissue crossover interaction. |
| 536 ## - FUNDING INFORMATION NOTE |
|---|
| Text of note |
Genetic Resources Program |
| 546 ## - LANGUAGE NOTE |
|---|
| Language note |
Text in English |
| 591 ## - CATALOGING NOTES |
|---|
| Affiliation |
0009 |
| 594 ## - STAFFID |
|---|
| StaffID |
INT3239|CCJL01 |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| Source of heading or term |
AGROVOC |
| 9 (RLIN) |
9059 |
| Topical term or geographic name as entry element |
Additive Effect |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| Source of heading or term |
AGROVOC |
| 9 (RLIN) |
3563 |
| Topical term or geographic name as entry element |
Genes |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| Source of heading or term |
AGROVOC |
| 9 (RLIN) |
6025 |
| Topical term or geographic name as entry element |
Linear models |
| 650 #7 - SUBJECT ADDED ENTRY--TOPICAL TERM |
|---|
| Source of heading or term |
AGROVOC |
| 9 (RLIN) |
8835 |
| Topical term or geographic name as entry element |
Gene Expression |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| 9 (RLIN) |
907 |
| Personal name |
Burgueño, J. |
| Miscellaneous information |
Genetic Resources Program |
| Field link and sequence number |
INT3239 |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| 9 (RLIN) |
21678 |
| Personal name |
Autran, D. |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| 9 (RLIN) |
21761 |
| Personal name |
Vielle-Calzada, J.P. |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| 9 (RLIN) |
9555 |
| Personal name |
Cornelius, P.L. |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| 9 (RLIN) |
21762 |
| Personal name |
Garcia, N. |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| 9 (RLIN) |
21763 |
| Personal name |
Salamanca, F. |
| 700 1# - ADDED ENTRY--PERSONAL NAME |
|---|
| 9 (RLIN) |
21764 |
| Personal name |
Arenas, D. |
| 773 0# - HOST ITEM ENTRY |
|---|
| Title |
Journal of Agricultural, Biological, and Environmental Statistics |
| Note |
633361 |
| Related parts |
v. 10, no. 3, p. 337-353 |
| Place, publisher, and date of publication |
New York (USA) : Springer, 2005. |
| Record control number |
G99016 |
| International Standard Serial Number |
1085-7117 |
| 856 4# - ELECTRONIC LOCATION AND ACCESS |
|---|
| Link text |
Access only for CIMMYT Staff |
| Uniform Resource Identifier |
https://hdl.handle.net/20.500.12665/314 |
| 942 ## - ADDED ENTRY ELEMENTS (KOHA) |
|---|
| Koha item type |
Article |
| Source of classification or shelving scheme |
Dewey Decimal Classification |
| Suppress in OPAC |
No |