Challenges and solutions to rice biological data curation at IRRI
Bruskiewich, R.
Challenges and solutions to rice biological data curation at IRRI - Tokyo (Japan) : International Society of Biocuration, 2010. - 1 page
Abstract only
The International Rice Research Institute (IRRI) hosts an ambitious scope of rice germplasm research|generating a diversity of rice biological data including structural and functional genomics, breeding and|phenotypic data. Systematic documentation and publication of such data, cross-linked to related|information in public online international plant databases is a major institutional challenge.|In this poster, we give a broad overview of data sets under curation at IRRI, highlighting key curatorial|issues including semantic codification (?rice ontology?), database representation, analysis protocols and end|user tools. In particular, we will show the ongoing evolution of germplasm genotype and phenotype data, in|its relation to genetic and genomic information available from public plant genome projects, by direct|comparison to the rice genome, or indirect comparative analysis to other plant species.
Text in English
Rice
Biological data
Germplasm
Challenges and solutions to rice biological data curation at IRRI - Tokyo (Japan) : International Society of Biocuration, 2010. - 1 page
Abstract only
The International Rice Research Institute (IRRI) hosts an ambitious scope of rice germplasm research|generating a diversity of rice biological data including structural and functional genomics, breeding and|phenotypic data. Systematic documentation and publication of such data, cross-linked to related|information in public online international plant databases is a major institutional challenge.|In this poster, we give a broad overview of data sets under curation at IRRI, highlighting key curatorial|issues including semantic codification (?rice ontology?), database representation, analysis protocols and end|user tools. In particular, we will show the ongoing evolution of germplasm genotype and phenotype data, in|its relation to genetic and genomic information available from public plant genome projects, by direct|comparison to the rice genome, or indirect comparative analysis to other plant species.
Text in English
Rice
Biological data
Germplasm