PANOMICS at the interface of root–soil microbiome and BNI
Ghatak, A.
PANOMICS at the interface of root–soil microbiome and BNI - United Kingdom : Elsevier Ltd., 2023.
Peer review
Nitrification and denitrification are soil biological processes responsible for large nitrogen losses from agricultural soils and generation of the greenhouse gas (GHG) N2O. Increased use of nitrogen fertilizer and the resulting decline in nitrogen use efficiency (NUE) are a major concern in agroecosystems. This nitrogen cycle in the rhizosphere is influenced by an intimate soil microbiome–root exudate interaction and biological nitrification inhibition (BNI). A PANOMICS approach can dissect these processes. We review breakthroughs in this area, including identification and characterization of root exudates by metabolomics and proteomics, which facilitate better understanding of belowground chemical communications and help identify new biological nitrification inhibitors (BNIs). We also address challenges for advancing the understanding of the role root exudates play in biotic and abiotic stresses.
Text in English
1360-1385 1878-4372 (Online)
https://doi.org/10.1016/j.tplants.2022.08.016
Roots
Soil microorganisms
Nitrification inhibitors
Greenhouse gases
Rhizosphere
PANOMICS at the interface of root–soil microbiome and BNI - United Kingdom : Elsevier Ltd., 2023.
Peer review
Nitrification and denitrification are soil biological processes responsible for large nitrogen losses from agricultural soils and generation of the greenhouse gas (GHG) N2O. Increased use of nitrogen fertilizer and the resulting decline in nitrogen use efficiency (NUE) are a major concern in agroecosystems. This nitrogen cycle in the rhizosphere is influenced by an intimate soil microbiome–root exudate interaction and biological nitrification inhibition (BNI). A PANOMICS approach can dissect these processes. We review breakthroughs in this area, including identification and characterization of root exudates by metabolomics and proteomics, which facilitate better understanding of belowground chemical communications and help identify new biological nitrification inhibitors (BNIs). We also address challenges for advancing the understanding of the role root exudates play in biotic and abiotic stresses.
Text in English
1360-1385 1878-4372 (Online)
https://doi.org/10.1016/j.tplants.2022.08.016
Roots
Soil microorganisms
Nitrification inhibitors
Greenhouse gases
Rhizosphere